AT1G72420.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : NADH:ubiquinone oxidoreductase intermediate-associated protein 30 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
NADH:ubiquinone oxidoreductase intermediate-associated protein 30; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (TAIR:AT1G17350.1); Has 543 Blast hits to 543 proteins in 193 species: Archae - 0; Bacteria - 127; Metazoa - 111; Fungi - 89; Plants - 98; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:27261367..27263186 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25487.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.53 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||
| Length | 228 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSRFRSLWQA SVNATKKALT WELEEWVPPV EKCIFKFNSK EDLKTWHLYS DSEYGGLSSA SLEIKDGGNR SDCNGVFSGN LSTDMREGSK WNINRSGFCG 101: MRSKKFDGFI DLEGYDSIAL RLKGDGRCYI STIYTENWVN SPGQAEDNSW QAFVFAPKGN WYTAKVPLTR YLPTWKGNVI DAEMEMNPGH VVGMSLSVNA 201: QGGGFIGAKS GAGDFQVEID WIKAVRMP |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)