AT4G29540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : bacterial transferase hexapeptide repeat-containing protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
bacterial transferase hexapeptide repeat-containing protein; FUNCTIONS IN: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity, transferase activity; INVOLVED IN: lipid biosynthetic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (InterPro:IPR010137); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G05210.1); Has 13439 Blast hits to 13165 proteins in 2031 species: Archae - 84; Bacteria - 8805; Metazoa - 8; Fungi - 21; Plants - 66; Viruses - 3; Other Eukaryotes - 4452 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:14497775..14499765 | ||||||||||||
| Molecular Weight (calculated) | 36458.70 Da | ||||||||||||
| IEP (calculated) | 7.50 | ||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||
| Length | 334 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MISLLKAREK LLSPLVSSTI RRLSSSLSYS REDSRDSEVL IHPSAVVHPN AVIGKGVSVG PYCTIGSSVK LGNGCKLYPS SHVFGNTELG ESCVLMTGAV 101: VGDELPGYTF IGCNNIIGHH AVVGVKCQDL KYKHGDECFL CIGNNNEIRE FCSIHRSSKP SDKTVIGDNN LIMGSCHIAH DCKIGDRNIF ANNTLLAGHV 201: VVEDNTHTAG ASVVHQFCHI GSFAFIGGGS VVSQDVPKYM MVAGERAELR GLNLEGLRRN GFTMSEMKSL RAAYRKIFMS TETVSLSFEE RLTELDQELY 301: SVPAVSAMLQ SIRDSFTESR RGICKFRQWL DSTT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)