AT5G50110.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: rRNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: rRNA small subunit methyltransferase G (InterPro:IPR003682); Has 6840 Blast hits to 6840 proteins in 2435 species: Archae - 0; Bacteria - 5096; Metazoa - 2; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 1704 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:20373515..20376068 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32492.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.42 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||
| Length | 292 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRSICSFVEN TKKMHCVSHI LSLGHLIKHL PCTKSHTFLR RRFHYKALSN ATVSTTASCF KTLSSSQQDQ IHLYVDTLLQ WNQKMNLTAT KEADEVMERH 101: IEDSLAILPP IKTCYNLHSS DLFDHINLID VGSGAGLPGL VLAIACPDWR VTLLESINKR CVFLEHVVNV TGLTNVTIVR GRAESCGHDV MYREKFDVAI 201: ARAVAEMRVL AEYCLPLVRI GGLFVAAKGH DPKEEVQNAE NAVRLLGGSI LQISPVDSHS PYGQRTTVVC RKDHSTPQKY PREAGTPAKL PL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)