AT3G20940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.902 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 30 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
a member of A-type cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 705, subfamily A, polypeptide 30 (CYP705A30); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 32 (TAIR:AT3G20950.1); Has 33333 Blast hits to 33151 proteins in 1652 species: Archae - 50; Bacteria - 3607; Metazoa - 11622; Fungi - 7384; Plants - 9408; Viruses - 6; Other Eukaryotes - 1256 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7339732..7341518 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59573.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.86 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 523 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAMITFDFQ NSFIFILFFL FSLLCYSLFF RKPKGSRAGR DLPPSPPSFP VIGHLHLLLS ALVHKSFQNI SSKYGPLLHL RVFHIPIVLA SSASVAYEIF 101: KAQDVNVSSR GHAPVGESLW FGSSSFFFAP YGDYFKFMRK LIATKLLGPQ ALERSRKIRA DELDRFYKTL LDKAMKKESV EIGEEAAKLN NNIICKMIMG 201: RSCSEENGEA EKFRHLVIES MALTKQIFFG MIFHKPLKKL GISLFQKDIL SLSRKFDELL EKILFEHEEK KAEHNQANDM MDFLLEAYGD ENAEYKITRN 301: HIKSLFVDLV IAGTDTSVQA TQWTMGELIN NPKILQRLRE EIESVVGNTR LIQENDLPNL PYLQAVVKEG LRLHPPGSIS VRMFQERCEL KGFYIPEKTL 401: LVVNTYAIMR DPNFWEDPEE FKPERFIASS RSEQEDEVRE EVLKYIPFSA GRRGCPGSNL AYISLGIVIG VMVQCFDWRI EGEKVNMNEA AETTALSMAQ 501: PLKCTPVSRT KNPLPSSLHI PSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)