AT1G66800.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.852 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity, cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, hypocotyl, root, pollen tube; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1); Has 12055 Blast hits to 12042 proteins in 2029 species: Archae - 224; Bacteria - 5367; Metazoa - 406; Fungi - 979; Plants - 2431; Viruses - 61; Other Eukaryotes - 2587 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24924854..24926238 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35196.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.09 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||
| Length | 319 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNGEGKVVCV TGASGYIASW IVKLLLLRGY TVRATVRNPM DTKKTNHLLT LEGASERLKL FKSDLLEEGS FDQAIEGCDG VFHTASPVSL TVTDPQTEMI 101: DPAVNGTLNV LRTCAKVSSV KRVIVTSSTA ATLSINPNDV VDETVFTDLS VYLAMKAWYG YSKTLAEETA WRFAKENGID LVVMNPGNVI GPVLQPTLNY 201: SVEVIVDLIN GKNPSNSFYY RFMDVRDVSL AHIKAFEVPS ASGRYILADP DVTMKDIQKL LHELFPDLCR VDKDNENEVG EMAYKVCVDK LKSLGIEFTP 301: IKESLKDTVV SLKERCLLI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)