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AT2G38695.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 65 Blast hits to 65 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
EMBL:AY648329EMBL:AY773866EMBL:CP002685EnsemblPlants:AT2G38695
EnsemblPlants:AT2G38695.1entrez:2745586ExpressionAtlas:Q6DSR9GeneID:2745586
GO:GO:0016021Gramene:AT2G38695.1hmmpanther:PTHR34370hmmpanther:PTHR34370:SF2
HOGENOM:HOG000077552PhylomeDB:Q6DSR9Proteomes:UP000006548RefSeq:NP_973635.2
TAIR:AT2G38695TMHMM:TMhelixUniGene:At.50749UniProt:Q6DSR9
Coordinates (TAIR10) chr2:+:16177946..16180236
Molecular Weight (calculated) 23348.90 Da
IEP (calculated) 10.30
GRAVY (calculated) 0.29
Length 212 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVAGVHRFS LPLPPKCSLR TFSVLANGKR TQSLLPHHFS VFNQSHRLVT SLSHNVSNKS DAEAERSCDE GEMLDKNRIS KKNPFVSEEL LKKLKRYGLS
101: GILSYGLLNT VYYSTAFLLV WFYVAPAPGK MGYLAAAERF LKVMAMVWAG SQVTKLIRIG GAVALAPIVD RGLSWFTVKC NFESQGKAFG ALVGICLGMA
201: LMLFIVVTLL WA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)