AT1G33330.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.735 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Class I peptide chain release factor | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 14711 Blast hits to 14711 proteins in 2768 species: Archae - 0; Bacteria - 10081; Metazoa - 256; Fungi - 228; Plants - 204; Viruses - 13; Other Eukaryotes - 3929 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:12084968..12086238 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27647.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.78 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||
| Length | 257 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAIMAVAALF HARFPLLLRR SIPLLSAPTS VIYNHRTLLS DGLSTRLCSI LRYSSSDGVN GGSSGGDFGN DNDSVSVVSD VQSPNYLKFT DEELMKQCRL 101: ETFRVSGPGG QHRNKRDSAV RLKHLPTGIV AQAVEDRSQH KNRASALNRL RTLLAIKVRN KVDIEAYAPP PELLQILPPK STIRTSSGSQ IGPNNPKFVP 201: GMQALLDVIS ASDGSIADSA KLLGLSTGGL SRLILSHDGL RMAVNSMRAA KGIKPLK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)