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AT4G02725.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZRZeggNOG:ENOG410XW0QEMBL:BT015066EMBL:BT015667EMBL:CP002687EnsemblPlants:AT4G02725EnsemblPlants:AT4G02725.1
entrez:2745608ExpressionAtlas:Q6DBF6GeneID:2745608GO:GO:0009507GO:GO:0016021Gramene:AT4G02725.1hmmpanther:PTHR36046
HOGENOM:HOG000006095IntAct:Q6DBF6OMA:RREPKDSPhylomeDB:Q6DBF6Proteomes:UP000006548RefSeq:NP_974503.1STRING:3702.AT4G02725.1
TAIR:AT4G02725TMHMM:TMhelixUniGene:At.47912UniProt:Q6DBF6
Coordinates (TAIR10) chr4:+:1206055..1207290
Molecular Weight (calculated) 18797.60 Da
IEP (calculated) 9.06
GRAVY (calculated) -0.15
Length 165 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLSMSAVS LSPFRPQTEN LLSKLSFRTN LHSFNLKPIR ISTKVRSFGG NRREPKDSRF VDEKGVVDDM EGFLDNLSLE YDSVWDTKPS WCQPWTIMLT
101: GLSIVACSWV ILHSVIVSSL AVGVIGAWWY IFLYSYPKSY SEMIAERRKR VADGFEDIYG KNKPS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)