AT3G48260.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.991 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : with no lysine (K) kinase 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
with no lysine (K) kinase 3 (WNK3); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 2 (TAIR:AT3G22420.1); Has 106620 Blast hits to 105555 proteins in 3648 species: Archae - 79; Bacteria - 10632; Metazoa - 39040; Fungi - 10406; Plants - 28734; Viruses - 420; Other Eukaryotes - 17309 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:17873012..17875220 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58952.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.33 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 516 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRQDENNSEE EFVEIDPTGR YGRYKEVLGK GAFKEVYRAF DQLEGIEVAW NQVKLDDKFC SSEDLDRLYS EVHLLKTLKH KSIIKFYTSW IDHQHMTINL 101: ITEVFTSGNL RQYRKKHKCV DLRALKKWSR QILEGLVYLH SHDPPVIHRD LKCDNIFING NQGEVKIGDL GLAAILHRAR SAHSVIGTPE FMAPELYEED 201: YNVLVDIYAF GMCLLELVTF EYPYSECTNA AQIYRKVTSG IKPAALLNVT DPQVRAFIEK CIAKVSQRLS AKELLDDPFL KCYKENTENV SSHKENGYNG 301: NGIVDKLSDS EVGLLTVEGQ RKDLNTIFLK LRITDSKGQI RNIHFPFNIE TDTSFSVAIE MVEELDLTDD QDISTIAKMI DTEIHSHIPD WTPSRLIGDD 401: SAVQKCLSSP ETLHLDRFPS GRKFWSSPKA GAGDSRSPFA PRSNSKLSSA QGPINQEVGV IVEKLESLLR KQREEIEEMQ RDQERIVTEF LKEFPPEICE 501: EALVRLQVKD SDNLLC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)