AT3G06630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.988 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein kinase family protein; FUNCTIONS IN: two-component sensor activity, protein serine/threonine kinase activity, protein kinase activity, signal transducer activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), PAS-associated, C-terminal (InterPro:IPR000700), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT3G06620.1); Has 127153 Blast hits to 125457 proteins in 4768 species: Archae - 339; Bacteria - 15978; Metazoa - 46871; Fungi - 11290; Plants - 33142; Viruses - 503; Other Eukaryotes - 19030 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2070388..2073791 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75180.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.96 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.53 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 671 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEELLKKML ELEQSQELLK QEMSRLKLST ELRQPSHPVL PRRPLRRIQG SMNSNPSPGK FTDKQYLNIL QSLAQSVHVL DLNTRIIFWN AMSEKLYGYS 101: AAEVVGRNPV HVIVDDQNAA FALNVARRCA NGESWTGEFP VKTKSGKIFS AVTTCSPFYD DNGTVVGIIS ITSDIAPYLN PRLSLPRLKP QEPERKLGLD 201: SKGAVISKPG LDSDQPIQVS IASKISSLAS KLSNKVRSKM RAGDNSACGD SHHSDHDVFG DTLSDHRDDA ASSGASTPRG DFIQSPFGVF TCYDDKFPSK 301: PSKDSSDRKP AIHKVPTSKA EEWMVKKGLS RPWKGNEQEG SRVRPTHSVW SWVENEQEKD KYHQIYPSAG VKSESHGSES NKPTDDEASN MWSSSINANS 401: TNSASSCGST SRSVMDKVDI DSDPLEHEIL WDDLTIGEQI GRGSCGTVYH GIWFGSDVAV KVFSKQEYSE SVIKSFEKEV SLMKRLRHPN VLLFMGAVTS 501: PQRLCIVSEF VPRGSLFRLL QRSMSKLDWR RRINMALDIA RGMNYLHCCS PPIIHRDLKS SNLLVDRNWT VKVADFGLSR IKHQTYLTSK SGKGTPQWMA 601: PEVLRNESAD EKSDIYSFGV VLWELATEKI PWENLNSMQV IGAVGFMNQR LEIPKDTDPD WISLIESCWH R |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)