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AT2G23300.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G37250.1); Has 130463 Blast hits to 92142 proteins in 3849 species: Archae - 98; Bacteria - 10554; Metazoa - 34539; Fungi - 5704; Plants - 66254; Viruses - 237; Other Eukaryotes - 13077 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G23300-MONOMEReggNOG:ENOG410IEIIeggNOG:ENOG410YAQDEMBL:AC002391EMBL:CP002685EMBL:FJ708697EnsemblPlants:AT2G23300
EnsemblPlants:AT2G23300.1entrez:816862Gene3D:3.80.10.10GeneID:816862GO:GO:0004672GO:GO:0005524GO:GO:0016021
Gramene:AT2G23300.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF35HOGENOM:HOG000116554InterPro:IPR000719InterPro:IPR001611InterPro:IPR011009
InterPro:IPR013210InterPro:IPR025875InterPro:IPR032675KEGG:ath:AT2G23300OMA:HSLEAHEPfam:PF00069Pfam:PF00560
Pfam:PF08263Pfam:PF12799Pfam:PF13516Pfam:PF13855Pfscan:PS50011PhylomeDB:O22178PIR:T00502
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_179911.1SMR:O22178SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT2G23300
TMHMM:TMhelixUniGene:At.52877UniProt:O22178
Coordinates (TAIR10) chr2:+:9914608..9917130
Molecular Weight (calculated) 84153.70 Da
IEP (calculated) 7.32
GRAVY (calculated) -0.23
Length 773 amino acids
Sequence (TAIR10)
(BLAST)
001: MKTQSASPFF FVSFFFFFFF FSSLFLLSSA LNSDGVLLLS FKYSVLLDPL SLLQSWNYDH DNPCSWRGVL CNNDSRVVTL SLPNSNLVGS IPSDLGFLQN
101: LQSLNLSNNS LNGSLPVEFF AADKLRFLDL SNNLISGEIP VSIGGLHNLQ TLNLSDNIFT GKLPANLASL GSLTEVSLKN NYFSGEFPGG GWRSVQYLDI
201: SSNLINGSLP PDFSGDNLRY LNVSYNQISG EIPPNVGAGF PQNATVDFSF NNLTGSIPDS PVYLNQKSIS FSGNPGLCGG PTRNPCPIPS SPATVSPPTS
301: TPALAAIPKS IGSNRETEPN NNSNPRTGLR PGVIIGIIVG DIAGIGILAL IFFYVYKYKN NKTVEKKNNH SLEAHEAKDT TSLSPSSSTT TSSSSPEQSS
401: RFAKWSCLRK NQETDETEEE DEENQRSGEI GENKKGTLVT IDGGEKELEV ETLLKASAYI LGATGSSIMY KTVLEDGTVL AVRRLGENGL SQQRRFKDFE
501: AHIRAIGKLV HPNLVRLRGF YWGTDEKLVI YDFVPNGSLV NARYRKGGSS PCHLPWETRL KIVKGLARGL AYLHDKKHVH GNLKPSNILL GQDMEPKIGD
601: FGLERLLAGD TSYNRASGSS RIFSSKRLTA SSREFGTIGP TPSPSPSSVG PISPYCAPES LRNLKPNPKW DVFGFGVILL ELLTGKIVSI DEVGVGNGLT
701: VEDGNRALIM ADVAIRSELE GKEDFLLGLF KLGYSCASQI PQKRPTMKEA LVVFERYPIS SSAKSPSYHY GHY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)