AT1G76020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Thioredoxin superfamily protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Thioredoxin superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G20225.1); Has 151 Blast hits to 149 proteins in 52 species: Archae - 0; Bacteria - 54; Metazoa - 12; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28532243..28533542 | ||||||||||||
| Molecular Weight (calculated) | 25256.30 Da | ||||||||||||
| IEP (calculated) | 8.43 | ||||||||||||
| GRAVY (calculated) | 0.00 | ||||||||||||
| Length | 225 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIRAVLLFLV FVVETRVQAQ LVPPVRQDGF VYPPGHRFDP DTILIEAYFD PVCPDSRDSW PPLKQALHHY GSRVALLLHL LPLPYHDNAY VTSRALHIVN 101: TVHANATFSL LEGFFKHQSL FYNAQTQLLS RPAVVEKIVE LGTVSLGNSY QSVLKSGFSD KKSDRATRVS FKYSASRGVY GTPTFYVNGF VLSDAASPSN 201: FGGWKKIIDP LVQAHEMEDN FIPFL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)