AT3G01920.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DHBP synthase RibB-like alpha/beta domain | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DHBP synthase RibB-like alpha/beta domain; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); Has 7227 Blast hits to 7227 proteins in 2277 species: Archae - 193; Bacteria - 5396; Metazoa - 127; Fungi - 76; Plants - 77; Viruses - 0; Other Eukaryotes - 1358 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:317449..319001 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33541.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.04 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||
| Length | 307 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVAKLHGGG MAAMRLLLLP SPMTHRRPST LPSTASLSPR RYIVALAAKR SPKRLKYSTP RFTKEGELVY IEVDPCGVDS WKLQPVIDLL KQGAVGVIPT 101: DTVYAIACDC KNHSAVERLR RIKKIESSKP LSILCRSLRD IDTFTMGFPR GDGHGHANVF RAVKQCLPGP YTFILTASKE LPKQCVGYGT TSVKYASRKN 201: VGVRISDDAL CQAILQQMDA PLICTSVKGP KENEWMIDPT AIGDIYGPEG LDFVVDGGIR VAEPSTIVDM TGPYPKVIRE GKGPILPWMV VEDDESSLRQ 301: DLMASGT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)