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AT1G60800.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.979
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NSP-interacting kinase 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NSP-interacting kinase 3 (NIK3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 2 (TAIR:AT3G25560.1); Has 179068 Blast hits to 122128 proteins in 4509 species: Archae - 118; Bacteria - 15693; Metazoa - 45449; Fungi - 8996; Plants - 88569; Viruses - 414; Other Eukaryotes - 19829 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G60800-MONOMERBioGrid:27598EC:2.7.11.1eggNOG:ENOG410IG2TeggNOG:ENOG410ZS46EMBL:AC002292EMBL:AY056294
EMBL:AY150495EMBL:CP002684EMBL:FJ708666EnsemblPlants:AT1G60800EnsemblPlants:AT1G60800.1entrez:842374Gene3D:2.60.120.200
Gene3D:3.80.10.10GeneID:842374Genevisible:Q93ZS4GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0006952
GO:GO:0016021GO:GO:0016032Gramene:AT1G60800.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF49HOGENOM:HOG000116554InParanoid:Q93ZS4
InterPro:IPR000719InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441
InterPro:IPR032675KEGG:ath:AT1G60800OMA:VLENWDVPaxDb:Q93ZS4Pfam:PF00069Pfam:PF08263Pfam:PF13855
Pfam:Q93ZS4Pfscan:PS50011PhylomeDB:Q93ZS4PIR:E96633PRO:PR:Q93ZS4PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q93ZS4Proteomes:UP000006548RefSeq:NP_176279.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q93ZS4STRING:3702.AT1G60800.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G60800tair10-symbols:NIK3TMHMM:TMhelix
UniGene:At.26337UniGene:At.3405UniProt:Q93ZS4
Coordinates (TAIR10) chr1:-:22383601..22386931
Molecular Weight (calculated) 70174.90 Da
IEP (calculated) 6.91
GRAVY (calculated) -0.20
Length 632 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGVRFVVWR LGFLVFVWFF DISSATLSPT GVNYEVTALV AVKNELNDPY KVLENWDVNS VDPCSWRMVS CTDGYVSSLD LPSQSLSGTL SPRIGNLTYL
101: QSVVLQNNAI TGPIPETIGR LEKLQSLDLS NNSFTGEIPA SLGELKNLNY LRLNNNSLIG TCPESLSKIE GLTLVDISYN NLSGSLPKVS ARTFKVIGNA
201: LICGPKAVSN CSAVPEPLTL PQDGPDESGT RTNGHHVALA FAASFSAAFF VFFTSGMFLW WRYRRNKQIF FDVNEQYDPE VSLGHLKRYT FKELRSATNH
301: FNSKNILGRG GYGIVYKGHL NDGTLVAVKR LKDCNIAGGE VQFQTEVETI SLALHRNLLR LRGFCSSNQE RILVYPYMPN GSVASRLKDN IRGEPALDWS
401: RRKKIAVGTA RGLVYLHEQC DPKIIHRDVK AANILLDEDF EAVVGDFGLA KLLDHRDSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG
501: QKALDFGRSA HQKGVMLDWV KKLHQEGKLK QLIDKDLNDK FDRVELEEIV QVALLCTQFN PSHRPKMSEV MKMLEGDGLA ERWEATQNGT GEHQPPPLPP
601: GMVSSSPRVR YYSDYIQESS LVVEAIELSG PR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)