AT2G16250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G39270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:7039682..7042933 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 99710.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.07 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 915 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVDQRRSALG FVLLLLCLVL FFDCVVVGQT QSRFSEKLIL LNLRSSLGLR GTDWPIKGDP CVDWRGIQCE NGSIIGINIS GFRRTRIGKL NPQFSVDPLR 101: NLTRLSYFNA SGLALPGTIP EWFGVSLLAL EVLDLSSCSV NGVVPFTLGN LTSLRTLNLS QNSLTSLVPS SLGQLLNLSQ LDLSRNSFTG VLPQSFSSLK 201: NLLTLDVSSN YLTGPIPPGL GALSKLIHLN FSSNSFSSPI PSELGDLVNL VDFDLSINSL SGSVPQELRK LSKLQLMAIG DNLLSGTLPV DLFSAESQLQ 301: TLVLRENGFS GSLPDVCWSL PKLRILDIAK NNFTGLLPYS SYDSDQIAEM VDISSNTFYG ELTPILRRFR IMDLSGNYFE GKLPDYVTGE NVSVTSNCLR 401: NERRQKPSAI CAAFYKSRGL DFDDFGRPNL TQPTSKNASS GISRRTVIIL AAVGGGVAFI LLFVILPIIL VLCMRHRRRA AQRGNNDRPK PAGEASQQPP 501: KGAQTFDLSR LGNAFSYEQL LQATEEFNDA NLIKRGHSGN LFRGFLENGI PVVIKKIDVR EGKSEGYISE LELFSKAGHQ RLVPFLGHCL ENESQKFLVY 601: KFMRHGDLAS SLFRKSENEG DGLKSLDWIT RLKIALGAAE GLSYLHHECS PPLVHRDVQA SSILLDDKFE VRLGSLSEAY AQGDAYQSRI SRLLRLPQSS 701: EPSSSGVTNA ICSYDVYCFG KVLLELVTGK LGISSPDNAL AKEYMEEALP YISTNEKELV TKILDPSLMV DEDLLEEVWA MAIIAKSCLN PKPTRRPLMR 801: HIVNALENPL KVVREDTNSG SGSSRLRTNS SRGSWNAAIF GSWRQSASDV TAVQAGATTS GGGGGGGGNG LRNSGSQGSS GRNNNNNGNS SSSRRRQSSE 901: IVPEPAAYGV VEDNL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)