AT5G24000.1::SUBA5

AT5G24000.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plastid 1.000
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:29967049 (2018): plastid	PMID:24833385 (2014): AT3G06360.1:None: PMID:24833385 (2014): AT4G29330.1:None: PMID:24833385 (2014): AT5G25940.1:None: PMID:24833385 (2014): AT1G70760.1:None: PMID:24833385 (2014): AT4G01410.1:None: PMID:24833385 (2014): AT2G05755.1:None: PMID:24833385 (2014): AT3G26370.1:None: PMID:24833385 (2014): AT3G66654.1:None: PMID:24833385 (2014): AT2G27290.1:None: PMID:24833385 (2014): AT3G28220.1:None: PMID:24833385 (2014): AT3G52070.1:None: PMID:24833385 (2014): AT5G03345.1:None: PMID:24833385 (2014): AT5G52420.1:None: PMID:24833385 (2014): AT1G21870.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT5G26820.1 plastid [5.2] AT2G22650.1 plastid [5.18] AT5G44660.1 nucleus [5.16] AT5G10690.1 plastid [5.16] AT1G78010.1 mitochondrion [5.12] AT3G63510.1 mitochondrion [5.06] AT5G42765.1 plastid [5.04] AT3G25660.1 plastid [5.04] AT1G23360.1 plastid [4.98] AT2G40690.1 plastid [4.96]	AT4G29330.1 endoplasmic reticulum AT5G03345.1 endoplasmic reticulum AT5G52420.1 endoplasmic reticulum AT3G06360.1 extracellular AT1G21870.1 golgi AT3G26370.1 golgi AT3G66654.1 golgi AT5G25940.1 mitochondrion AT2G05755.1 plasma membrane AT4G01410.1 plasma membrane AT1G70760.1 plastid AT2G27290.1 plastid AT3G52070.1 plastid AT3G28220.1 vacuole

Description (TAIR10)

protein_coding : Protein of unknown function (DUF819)

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

Protein of unknown function (DUF819); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF819 (InterPro:IPR008537); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF819) (TAIR:AT5G52540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

Protein Annotations

eggNOG:COG5505	eggNOG:ENOG410IH6G	EMBL:AB009056	EMBL:CP002688
EnsemblPlants:AT5G24000	EnsemblPlants:AT5G24000.1	entrez:832465	GeneID:832465
GO:GO:0016021	Gramene:AT5G24000.1	hmmpanther:PTHR34289	hmmpanther:PTHR34289:SF2
HOGENOM:HOG000220761	InterPro:IPR008537	KEGG:ath:AT5G24000	OMA:TACAMAT
Pfam:PF05684	PhylomeDB:Q9FLW1	Proteomes:UP000006548	RefSeq:NP_197788.1
TAIR:AT5G24000	TMHMM:TMhelix	UniGene:At.30982	UniProt:Q9FLW1

Coordinates (TAIR10)

chr5:-:8110380..8112692

Molecular Weight (calculated)

47147.70 Da

IEP (calculated)

10.47

GRAVY (calculated)

0.75

Length

443 amino acids

Sequence (TAIR10)
(BLAST)

001: MALLFTVVSP NPLSPTISSL HVSPSRHHLS SSITIRRNKS PPVTLTPHRL VSSRRRRVKV YSQLRFPLIS PDDHWSQWAA LFAAGAFGVW SEKTKIGSMV
101: SGALTSTLLG LAASNLRLIP FETPSYGFFM EFLLPHTIPL LLFRADLRRI IRSTGSLLLA FLIGSVATIV GTVVAFMLVP MRSLGPDNWK IAAALMGSYI
201: GGSLNFVAIS EALQISPSVI AAGVAVDNVI CALHFMVLFA LASKIPPETA SASSPDADMT KDDKLEDKNR VVSTSIALSV SFLICKAAIT LTTLFKIQGV
301: MLPAVTAITI VLATSFPDFF NSLAPSAETI SLILMQVFFT ILGATGSVWN VINTAPSIFL FAAIQVMVHL AVTLVLGKLF CIDMKLLLLA SNANIGGPTT
401: ACAMATAKGW TSLVVPGILS GVFGVSIATF LGIGCGVFVL KRL