AT1G58210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : kinase interacting family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
EMBRYO DEFECTIVE 1674 (EMB1674); CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT1G09720.1); Has 30818 Blast hits to 19641 proteins in 1442 species: Archae - 565; Bacteria - 3414; Metazoa - 15518; Fungi - 2982; Plants - 1779; Viruses - 78; Other Eukaryotes - 6482 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:21553621..21558056 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 141004.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.30 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.79 | ||||||||||||||||||||||||||||||||
| Length | 1246 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MTTTRAKSKF QSLSACRFTP LPEPNTSPST YSKTLPKPNS SPGTDGTFPT PFPLAVITPI KTLKSVTLSD WWLTKKGKDL CIKGFESNGA SGVRLFSSGT 0101: ISKRHESTTL EAIDGITISI NGFINRSRCL ENGISIEVCN RFRLGFPYDW EDYNEEEEEK KKKNVDISFD DIPVNRYQDL YSLEGCLKDK ILDDVVGSLR 0201: DLVCQKSDKA CEKSRVGDVD DDDDDDDDKS LVSRVVGVKT RGMLRRREEY EASIGKRVAT MSGKRVVTVS KKKNRRRSFG CSYVDDLAMF EPSSASSSLV 0301: QEKRCCREQR AMLIHGGGQA TYVQNNPNGS NTIFRVEYTL KIIDEDGDTF AKRAEMYYRK RPEIVNFVEE AFRSYRALAE RYDHLSRELQ SANRTIATAF 0401: PEHVQFPLED DSDENEDYDG RPRKPPKHLH LIPKGINIPE VPDIPKKKDF RSQSMMLSRK GPADLKRNVS SAQAKREAAI VRSGLSKEEG LEEIDKLQKG 0501: ILALQTEKEF VRSSYEESYE RYWDLENEVT EMQKSVCNLQ DEFGLGASID DSDARTLMAS TALSSCRDTL AKLEEKQKIS IEEAEIEKGR ITTAKERFYA 0601: LRNKFEKPES DVLDEVIRTD EEEEDVVQES SYESEREDSN ENLTVVKLAE KIDDLVHRVV SLETNASSHT ALVKTLRSET DELHEHIRGL EEDKAALVSD 0701: ATVMKQRITV LEDELRNVRK LFQKVEDQNK NLQNQFKVAN RTVDDLSGKI QDVKMDEDVE GAGIFQELPV VSGSEDSRDD LKSVSTEKTK KDVIAVKESE 0801: DGERAQEEKP EIKDSFALSE TASTCFGTEA EDLVTEDEDE ETPNWRHLLP DGMEDREKVL LDEYTSVLRD YREVKRKLGD VEKKNREGFF ELALQLRELK 0901: NAVAYKDVEI QSLRQKLDTT GKDSPHQGEG NNQLEHEQGH HETVSISPTS NFSVATTPHH QVGDVKRTPG RTKSTEVRVK FADVDDSPRT KIPTVEDKVR 1001: ADIDAVLEEN LEFWLRFSTS VHQIQKYQTT VQDLKSELSK LRIESKQQQE SPRSSSNTAV ASEAKPIYRH LREIRTELQL WLENSAVLKD ELQGRYASLA 1101: NIQEEIARVT AQSGGNKVSD SEISGYQAAK FHGEILNMKQ ENKRVSTELH SGLDRVRALK TEVERILSKL EEDLGISSAT EARTTPSKSS SSGRPRIPLR 1201: SFLFGVKLKK NRQQKQSASS LFSCVSPSPG LHKQSSYSRP PGKLPE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)