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AT2G26350.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : peroxin 10
Curator
Summary (TAIR10)
Zinc-binding peroxisomal integral membrane protein (PEX10). Inserted directly from the cytosol into peroxisomes and is involved in importing proteins into the peroxisome. Required for embryogenesis.
Computational
Description (TAIR10)
peroxin 10 (PEX10); FUNCTIONS IN: zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, peroxisome; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Pex, N-terminal (InterPro:IPR006845), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 (TAIR:AT4G03510.2); Has 4616 Blast hits to 4603 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2406; Fungi - 531; Plants - 966; Viruses - 101; Other Eukaryotes - 612 (source: NCBI BLink).
Protein Annotations
BioGrid:2527eggNOG:COG5574eggNOG:KOG0317EMBL:AC002505EMBL:AC004484EMBL:AF119572EMBL:AJ276134
EMBL:AK117879EMBL:AY087109EMBL:BT005340EMBL:CP002685EnsemblPlants:AT2G26350EnsemblPlants:AT2G26350.1entrez:817175
Gene3D:3.30.40.10GeneID:817175Genevisible:Q9SYU4GO:GO:0004842GO:GO:0005777GO:GO:0005778GO:GO:0005779
GO:GO:0005829GO:GO:0006513GO:GO:0006635GO:GO:0007031GO:GO:0008270GO:GO:0009793GO:GO:0009853
GO:GO:0010381GO:GO:0016558Gramene:AT2G26350.1hmmpanther:PTHR23350HOGENOM:HOG000005805InParanoid:Q9SYU4IntAct:Q9SYU4
InterPro:IPR001841InterPro:IPR006845InterPro:IPR013083InterPro:IPR017907InterPro:IPR025654KEGG:ath:AT2G26350KO:K13346
MINT:MINT-8068819OMA:IYLRHYRPANTHER:PTHR23350PaxDb:Q9SYU4Pfam:PF04757Pfam:PF13639Pfam:Q9SYU4
Pfscan:PS50089PhylomeDB:Q9SYU4PIR:T00968PRIDE:Q9SYU4PRO:PR:Q9SYU4PROSITE:PS00518PROSITE:PS50089
ProteinModelPortal:Q9SYU4Proteomes:UP000006548RefSeq:NP_565621.1scanprosite:PS00518SMART:SM00184SMR:Q9SYU4STRING:3702.AT2G26350.1
SUPFAM:SSF57850TAIR:AT2G26350tair10-symbols:ATPEX10tair10-symbols:PEX10TCDB:3.A.20.1.2UniGene:At.22386UniProt:Q9SYU4
Coordinates (TAIR10) chr2:-:11217767..11220415
Molecular Weight (calculated) 42616.90 Da
IEP (calculated) 7.67
GRAVY (calculated) -0.21
Length 381 amino acids
Sequence (TAIR10)
(BLAST)
001: MRLNGDSGPG QDEPGSSGFH GGIRRFPLAA QPEIMRAAEK DDQYASFIHE ACRDAFRHLF GTRIALAYQK EMKLLGQMLY YVLTTGSGQQ TLGEEYCDII
101: QVAGPYGLSP TPARRALFIL YQTAVPYIAE RISTRAATQA VTFDESDEFF GDSHIHSPRM IDLPSSSQVE TSTSVVSRLN DRLMRSWHRA IQRWPVVLPV
201: AREVLQLVLR ANLMLFYFEG FYYHISKRAS GVRYVFIGKQ LNQRPRYQIL GVFLLIQLCI LAAEGLRRSN LSSITSSIQQ ASIGSYQTSG GRGLPVLNEE
301: GNLITSEAEK GNWSTSDSTS TEAVGKCTLC LSTRQHPTAT PCGHVFCWSC IMEWCNEKQE CPLCRTPNTH SSLVCLYHSD F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)