suba logo
AT5G57610.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 0.927
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 119780 Blast hits to 118332 proteins in 4796 species: Archae - 124; Bacteria - 12838; Metazoa - 46034; Fungi - 10270; Plants - 32306; Viruses - 451; Other Eukaryotes - 17757 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G57610-MONOMEReggNOG:COG0515eggNOG:KOG0192EMBL:AB011482EMBL:CP002688EnsemblPlants:AT5G57610EnsemblPlants:AT5G57610.1
entrez:835865GeneID:835865GO:GO:0004712GO:GO:0005524Gramene:AT5G57610.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF331
HOGENOM:HOG000083073InterPro:IPR000270InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441
KEGG:ath:AT5G57610OMA:DRAWHAHPfam:PF00564Pfam:PF07714Pfscan:PS50011PhylomeDB:Q9FKL3PRINTS:PR00109
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548Reactome:R-ATH-442742Reactome:R-ATH-5674499RefSeq:NP_200569.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMART:SM00666SMR:Q9FKL3STRING:3702.AT5G57610.1SUPFAM:SSF54277
SUPFAM:SSF56112TAIR:AT5G57610UniGene:At.29325UniProt:Q9FKL3
Coordinates (TAIR10) chr5:+:23325307..23329099
Molecular Weight (calculated) 117451.00 Da
IEP (calculated) 5.83
GRAVY (calculated) -0.67
Length 1054 amino acids
Sequence (TAIR10)
(BLAST)
0001: MDSGSVNSSV TSLVSSLNDE PHRVKFLCSF LGSILPRPQD GKLRYVGGET RIVSVNRDIR YEELMSKMRE LYDGAAVLKY QQPDEDLDAL VSVVNDDDVT
0101: NMMEEYDKLG SGDGFTRLRI FLFSTPEQDG SLHYVERDDQ RESERRYVDA LNNLIEGTDF RKLQQYPDSP RFNLVDDFSM VEPMLNQLSI ETGGGSQRGN
0201: EIPTAQYSNL HQLRIPRVGS GQMLAQRYGE VEGTWSPFYS PRHHGHHDPR TFQEFPSSPS SARYRMPYGE IPDKGLDRMP EEYVRPQASH HPFYEHQAHI
0301: PDSVVWVPAG AMPPESKGGF PGNVLHGGPG GYEGGNGCEN CRVPYHRNHQ LLEQSNIGNN GFPPVHCAHC PPNRESFLLN TDPKPTHHGA YPNETFGPDR
0401: GWMVQQQVNP NPPRIEEGRS HISNVGRPND HYTPDYPVSN YPLGQRAGHE ISNEGFHDKP LGGIPLNSAN RSAEERGFHY GNNLYPPGPD SIHSAGHSHM
0501: HHPQPNIWQN VSNPIAGPPG LPMQINGTVN QTVIRNPIET APRYSTGMEN QGVLVGSPQR ISGFDGMSSL GQPSYPNPHL QDRAFPLDPN WVPSENPTVH
0601: NEHLQVREPL PGPLLQTNLT AAPIMQTPVM QTSVESKLAQ GGEQFNYVNT GISNGVPYQD KPQPLAGGKK DMGNLVEVNP SAATLEGAEL SVERLSFLPE
0701: LMESVKRAAL EGAAEVKAHP EEAKDQVRPE LVENESEHMN AQDEPEIDSD SDNPNNFKIE QTKAEAEAKS RGLQSIRNDD LEEIRELGHG TYGSVYHGKW
0801: KGSDVAIKRI KASCFAGKPS ERERLIEDFW KEALLLSSLH HPNVVSFYGI VRDGPDGSLA TVAEFMVNGS LKQFLQKKDR TIDRRKRLII AMDTAFGMEY
0901: LHGKNIVHFD LKCENLLVNM RDPQRPICKI GDLGLSKVKQ KTLVSGGVRG TLPWMAPELL SGKSNMVSEK IDVYSFGIVM WELLTGEEPY ADMHCASIIG
1001: GIVNNALRPK IPQWCDPEWK GLMESCWTSE PTERPSFTEI SQKLRTMAAA MNLK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)