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AT5G47030.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ATPase, F1 complex, delta/epsilon subunit
Curator
Summary (TAIR10)
Encodes the mitochondrial ATP synthase subunit delta.
Computational
Description (TAIR10)
ATPase, F1 complex, delta/epsilon subunit; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, mitochondrial proton-transporting ATP synthase complex, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0355eggNOG:KOG1758EMBL:AB013394EMBL:AF360175EMBL:AY056349EMBL:CP002688EMBL:D88376
EnsemblPlants:AT5G47030EnsemblPlants:AT5G47030.1entrez:834749Gene3D:2.60.15.10GeneID:834749Genevisible:Q96252GO:GO:0000275
GO:GO:0005739GO:GO:0005753GO:GO:0008270GO:GO:0009651GO:GO:0015986GO:GO:0046933GO:GO:0046961
Gramene:AT5G47030.1HAMAP:MF_00530hmmpanther:PTHR13822hmmpanther:PTHR13822:SF7HOGENOM:HOG000242325IntAct:Q96252InterPro:IPR001469
InterPro:IPR020546KEGG:ath:AT5G47030KO:K02134MINT:MINT-4330274ncoils:CoilOMA:ISISTCYPANTHER:PTHR13822
PaxDb:Q96252Pfam:PF02823Pfam:Q96252PhylomeDB:Q96252PRIDE:Q96252PRO:PR:Q96252ProDom:PD000944
ProteinModelPortal:Q96252Proteomes:UP000006548RefSeq:NP_199514.1SMR:Q96252STRING:3702.AT5G47030.1SUPFAM:SSF51344TAIR:AT5G47030
TIGRfam:TIGR01216TIGRFAMs:TIGR01216UniGene:At.23416UniGene:At.23498UniGene:At.67085UniProt:Q96252
Coordinates (TAIR10) chr5:+:19090384..19092034
Molecular Weight (calculated) 21548.90 Da
IEP (calculated) 6.69
GRAVY (calculated) 0.02
Length 203 amino acids
Sequence (TAIR10)
(BLAST)
001: MFKQASRLLS RSVAAASSKS VTTRAFSTEL PSTLDSTFVE AWKKVAPNMD PPQTPSAFMK PRPSTPSSIP TKLTVNFVLP YTSELTGKEV DMVIIPASTG
101: QMGVLPGHVP TIAELKPGIM SVHEGTDVKK YFLSSGFAFL HANSVADIIA VEAVPLDHID PSQVQKGLAE FQQKLASATT DLEKAEAQIG VEVHSAINAA
201: LSG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)