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AT5G13780.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.516
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Acyl-CoA N-acyltransferases (NAT) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G03150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G13780-MONOMEReggNOG:COG0456eggNOG:KOG3235EMBL:AB011484EMBL:AY054554EMBL:AY064689EMBL:AY087018
EMBL:CP002688EnsemblPlants:AT5G13780EnsemblPlants:AT5G13780.1entrez:831223Gene3D:3.40.630.30GeneID:831223GO:GO:0008080
Gramene:AT5G13780.1hmmpanther:PTHR23091hmmpanther:PTHR23091:SF4HOGENOM:HOG000078523IntAct:Q9FKI4InterPro:IPR000182InterPro:IPR016181
KEGG:ath:AT5G13780KO:K00670OMA:PENYTMKPfam:PF00583Pfscan:PS51186PhylomeDB:Q9FKI4PROSITE:PS51186
Proteomes:UP000006548RefSeq:NP_196882.1SMR:Q9FKI4STRING:3702.AT5G13780.1SUPFAM:SSF55729TAIR:AT5G13780UniGene:At.71038
UniGene:At.9249UniProt:Q9FKI4
Coordinates (TAIR10) chr5:-:4447610..4448603
Molecular Weight (calculated) 21715.90 Da
IEP (calculated) 7.41
GRAVY (calculated) -0.42
Length 192 amino acids
Sequence (TAIR10)
(BLAST)
001: MVCIRRATVD DLLAMQACNL MCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEESNECHG HITSLAVLRT HRKLGLATKL MTAAQAAMEQ
101: VYEAEYVSLH VRRSNRAAFN LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE TAQAVDGKAV SK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)