AT5G07140.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.698 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58520.1); Has 63076 Blast hits to 62625 proteins in 2279 species: Archae - 41; Bacteria - 4545; Metazoa - 25060; Fungi - 4515; Plants - 20509; Viruses - 254; Other Eukaryotes - 8152 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:2212877..2215133 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64461.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.60 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||
| Length | 583 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASALECWTT RNAAGGCADD DFVDQVLMSS EDRSESLTAP PPSDQTSSAM QKRFQRLGRN VSDAIASLKN SLNLDSSRDN QNAATGGGRK LVWATVVRNL 101: AKMYPGSQLP DKLVSNLRKH YDSLPLSYSQ TGFDMKDVFV HIKLIEQAFG DDNPVFVIQE VCDEEADDQG SVFKLTFACT CSLPWSTISG SLDGALICCK 201: KVQIFEKKGL TLGVVLLLVE SGQEKMFKVK VVNALRSAVR KPKSTSVKLP FGLCGCEEQN AGVGEFGDVD VESIDQCYRH ELDDLNTRIQ LQMPPPSSSF 301: SVSVDEWQTI QSGGDDIRKW LLNSDDLEFS GQLGPNSFKG VYRGTKVAIE KLKGCEKGNS YEFAIRKDFL ELMTCGHKSI LQFYGVCIDE NHGLCVVTKL 401: MQGGSLRELV LKKKKLQTKL IFQIAVDIAE GMKFINDHGV AYRDLNTQRI LLDKQCNACL GDLGIVTACK SVNEAMEYET DGYRWLAPEI IAGDPEKTRE 501: SWMSNAYSFG MVLWEMVTGE EAYGSCSPVQ AAVGIAACGL RPDIPKECPQ VLKYLMIKCW NTCPSTRLNF SQIHCILLRA ISR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)