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AT4G36180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 17317660
AmiGO : plasma membrane 17644812
TAIR : plasma membrane 17317660
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich receptor-like protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G75640.1); Has 274404 Blast hits to 147338 proteins in 4291 species: Archae - 207; Bacteria - 28458; Metazoa - 89754; Fungi - 12028; Plants - 112070; Viruses - 470; Other Eukaryotes - 31417 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G36180-MONOMERBioGrid:15057EC:2.7.11.1eggNOG:COG0515eggNOG:COG4886eggNOG:ENOG410IG4DEMBL:AL022141
EMBL:AL161588EMBL:AY080606EMBL:CP002687EMBL:FJ708764EnsemblPlants:AT4G36180EnsemblPlants:AT4G36180.1entrez:829775
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:829775Genevisible:C0LGS2GO:GO:0004674GO:GO:0005524GO:GO:0005886
GO:GO:0016021Gramene:AT4G36180.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF41HOGENOM:HOG000116551InParanoid:C0LGS2InterPro:IPR000719
InterPro:IPR001245InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320
InterPro:IPR032675iPTMnet:C0LGS2KEGG:ath:AT4G36180OMA:VTANTIGPaxDb:C0LGS2Pfam:C0LGS2Pfam:PF00560
Pfam:PF07714Pfam:PF08263Pfam:PF13855Pfscan:PS50011PhylomeDB:C0LGS2PIR:T04587PRIDE:C0LGS2
PRO:PR:C0LGS2PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:C0LGS2Proteomes:UP000006548RefSeq:NP_195341.2scanprosite:PS00108
SMART:SM00220SMART:SM00369SMR:C0LGS2STRING:3702.AT4G36180.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT4G36180
TMHMM:TMhelixUniGene:At.2123UniProt:C0LGS2
Coordinates (TAIR10) chr4:-:17120209..17123698
Molecular Weight (calculated) 123672.00 Da
IEP (calculated) 6.31
GRAVY (calculated) -0.03
Length 1136 amino acids
Sequence (TAIR10)
(BLAST)
0001: MAMDISLFFI FLVIYAPLVS YADESQAEID ALTAFKLNLH DPLGALTSWD PSTPAAPCDW RGVGCTNHRV TEIRLPRLQL SGRISDRISG LRMLRKLSLR
0101: SNSFNGTIPT SLAYCTRLLS VFLQYNSLSG KLPPAMRNLT SLEVFNVAGN RLSGEIPVGL PSSLQFLDIS SNTFSGQIPS GLANLTQLQL LNLSYNQLTG
0201: EIPASLGNLQ SLQYLWLDFN LLQGTLPSAI SNCSSLVHLS ASENEIGGVI PAAYGALPKL EVLSLSNNNF SGTVPFSLFC NTSLTIVQLG FNAFSDIVRP
0301: ETTANCRTGL QVLDLQENRI SGRFPLWLTN ILSLKNLDVS GNLFSGEIPP DIGNLKRLEE LKLANNSLTG EIPVEIKQCG SLDVLDFEGN SLKGQIPEFL
0401: GYMKALKVLS LGRNSFSGYV PSSMVNLQQL ERLNLGENNL NGSFPVELMA LTSLSELDLS GNRFSGAVPV SISNLSNLSF LNLSGNGFSG EIPASVGNLF
0501: KLTALDLSKQ NMSGEVPVEL SGLPNVQVIA LQGNNFSGVV PEGFSSLVSL RYVNLSSNSF SGEIPQTFGF LRLLVSLSLS DNHISGSIPP EIGNCSALEV
0601: LELRSNRLMG HIPADLSRLP RLKVLDLGQN NLSGEIPPEI SQSSSLNSLS LDHNHLSGVI PGSFSGLSNL TKMDLSVNNL TGEIPASLAL ISSNLVYFNV
0701: SSNNLKGEIP ASLGSRINNT SEFSGNTELC GKPLNRRCES STAEGKKKKR KMILMIVMAA IGAFLLSLFC CFYVYTLLKW RKKLKQQSTT GEKKRSPGRT
0801: SAGSRVRSST SRSSTENGEP KLVMFNNKIT LAETIEATRQ FDEENVLSRT RYGLLFKANY NDGMVLSIRR LPNGSLLNEN LFKKEAEVLG KVKHRNITVL
0901: RGYYAGPPDL RLLVYDYMPN GNLSTLLQEA SHQDGHVLNW PMRHLIALGI ARGLGFLHQS NMVHGDIKPQ NVLFDADFEA HISDFGLDRL TIRSPSRSAV
1001: TANTIGTLGY VSPEATLSGE ITRESDIYSF GIVLLEILTG KRPVMFTQDE DIVKWVKKQL QRGQVTELLE PGLLELDPES SEWEEFLLGI KVGLLCTATD
1101: PLDRPTMSDV VFMLEGCRVG PDVPSSADPT SQPSPA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)