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AT4G35980.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.583
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J30QeggNOG:ENOG4112APUEMBL:AK227866EMBL:AY088610EMBL:BT025567EMBL:CP002687EnsemblPlants:AT4G35980
EnsemblPlants:AT4G35980.1entrez:829752GeneID:829752Gramene:AT4G35980.1hmmpanther:PTHR21068hmmpanther:PTHR21068:SF3HOGENOM:HOG000241372
KEGG:ath:AT4G35980OMA:CIGEDVRPhylomeDB:Q8L969Proteomes:UP000006548RefSeq:NP_567994.1STRING:3702.AT4G35980.1TAIR:AT4G35980
UniGene:At.31366UniProt:Q8L969
Coordinates (TAIR10) chr4:-:17030816..17031586
Molecular Weight (calculated) 9530.17 Da
IEP (calculated) 5.69
GRAVY (calculated) -0.61
Length 87 amino acids
Sequence (TAIR10)
(BLAST)
1: MTEEYEVDEQ KQAAADVLFS YSKFAMACIG NHTRPTDMRL HLMKEISGMP TSLKGRDSSR AASPDPLGES SSSGTARLDK TDSFRAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)