AT4G23470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : PLAC8 family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 7925 Blast hits to 4553 proteins in 452 species: Archae - 4; Bacteria - 911; Metazoa - 2683; Fungi - 783; Plants - 1518; Viruses - 367; Other Eukaryotes - 1659 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12249289..12251079 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28428.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.77 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||
| Length | 255 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPKQDMEKME LRKNFRNVWH TDLTHSIQND TPYCCFALWC APCASYLLRK RALYDDMSRY VCCAGYMPCS GRCGEAKCPQ LCLATEVFCC FANSVASTRF 101: LLQDEFQIQT TKCDNCIIGF MVCLSQVACI FSIVACIVGM DELSEASQIL TCCSDMVYCT VCACMQTQHK MEMDKRDGKF GPQPMAVPPA QQMSRFDQAT 201: PPAVGYPPQQ GYPPSGYPQH PPQGYPPSGY PQNPPPSAYS QYPPGAYPPP PAYPK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)