AT4G17150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.957 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G14290.1); Has 2710 Blast hits to 2708 proteins in 908 species: Archae - 16; Bacteria - 1896; Metazoa - 181; Fungi - 45; Plants - 202; Viruses - 0; Other Eukaryotes - 370 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:9638591..9641648 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56418.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.80 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||||||||||
| Length | 502 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSLVLGIKM IDQFINFVIR PPRAEYDPDQ YLWEKEFSLG GTKCKRQDLE LTNSRGHTLR CSHYVPSSSR EDTPLPCVIY CHGNSGCRAD ANEAVMVLLP 101: SNITVFTLDF SGSGLSEGDY VSLGWHEKDD LKTVVSYLRN SNQVSRIGLW GRSMGAVTSL LYGAEDPSIA GMVLDSAFSN LFDLMMELVD VYKIRLPKFT 201: VKVAVQYMRR IIQKKAKFNI MDLNCVKVSP KTFIPALFGH ASGDKFIQPH HSDLILKCYA GDKNIIKFDG DHNSSRPQSY YDSVLVFFYN VLRPPPISSS 301: YSSKLESYYS LGDVNSATGL DESFLYEIIS GLRSACIDVA SSSSAPPAPL TTKPTNELLS EAMPMIDTDT VLVEDNDHNV DDPENFEGKR IDQFEEGCSF 401: TSSNRESWGR CSSLGGTEED ESLTAGEGDQ VEKTADVNTE RKPRDSSREE EEEDSKEKKI KNGGETDAKK PRHEKLERLE AFSKRLRHYI LKRVNHRRHR 501: SP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)