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AT3G20100.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.481
extracellular 0.241
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 19
Curator
Summary (TAIR10)
member of CYP705A
Computational
Description (TAIR10)
cytochrome P450, family 705, subfamily A, polypeptide 19 (CYP705A19); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 32 (TAIR:AT3G20950.1); Has 32760 Blast hits to 32520 proteins in 1638 species: Archae - 50; Bacteria - 3650; Metazoa - 11393; Fungi - 7084; Plants - 9331; Viruses - 6; Other Eukaryotes - 1246 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G20100-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:AP000383EMBL:AY050415EMBL:BT003043EMBL:CP002686
EnsemblPlants:AT3G20100EnsemblPlants:AT3G20100.1entrez:821553Gene3D:1.10.630.10GeneID:821553GO:GO:0005506GO:GO:0016020
GO:GO:0016709GO:GO:0020037GO:GO:0044550Gramene:AT3G20100.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF59InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT3G20100OMA:DWRINGEPfam:PF00067PhylomeDB:Q9LJY8PRINTS:PR00463
PROSITE:PS00086Proteomes:UP000006548RefSeq:NP_188645.1scanprosite:PS00086SMR:Q9LJY8STRING:3702.AT3G20100.1SUPFAM:SSF48264
TAIR:AT3G20100tair10-symbols:CYP705A19TMHMM:TMhelixUniGene:At.6684UniProt:Q9LJY8
Coordinates (TAIR10) chr3:+:7019014..7020649
Molecular Weight (calculated) 58264.20 Da
IEP (calculated) 8.52
GRAVY (calculated) -0.09
Length 513 amino acids
Sequence (TAIR10)
(BLAST)
001: MTTTEFQSCF IFLLLCLFSL VCYSLFFRKP SSRRDAHGCD LPPSPPSLPV IGHLHLILSS LVHKSFQKIS SNYGPLLHLR IFNVPIVLVS SASVAYDIFR
101: VHDLNVSSRG SPPFEESLLF GSTGFISAPY GDYFKFMKKH LVTKLLGPQA LERSRLIRTN ELERFYINLL DKATKKESVE IGKEAMKLSN NSICKMIMGR
201: SCLEEKGEAE RVRGLIIESF YLTKKFFLAF TLRGLLEKLG ISLFKKEIMG VSRRFDDLLE RYLREHEEKP DNEHQDTDMI DALLAAYRDE KAEYKITRNQ
301: IKAFLVDIFI AGTDISALTT QGTMAEIINN PNIFVRIREE IDSVVGKSRL IQETDLPKLP YLQAVVKEGL RLHPPTPLMV REFQEGCKVK GFYIPASTTL
401: VVNGYAVMRD PNVWEDPEEF KPERFLASSR LMQEDEIREQ ALKYIAFGSG RRGCPGANVA YIFVGTAIGM MVQCFDWRIN GEKVDMKEAI GGLNLTLAHP
501: LKCTPVARFP KPF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)