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AT3G06730.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Thioredoxin z
Curator
Summary (TAIR10)
Encodes a plastidial thioredoxin (TRX) isoform that defines a branch of plastidial TRXs lying between x- and y-type TRXs and thus was named TRX z. Possesses disulfide reductase activity in vitro. TRX z was previously named as Trx p (thioredoxin putative and plastidic) before its thioredoxin activity was confirmed (Meng et al., PNAS 2010, 107:3900). Knockout mutant of TRX z has a severe albino phenotype and is inhibited in chloroplast development. Two fructokinase-like proteins (FLN1 and FLN2), members of the pfkB-carbohydrate kinase family, are potential TRX z targets.
Computational
Description (TAIR10)
Thioredoxin z (TRX z); FUNCTIONS IN: protein-disulfide reductase activity, protein disulfide oxidoreductase activity; INVOLVED IN: plastid organization, cell redox homeostasis; LOCATED IN: thylakoid, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 15064 Blast hits to 14650 proteins in 2900 species: Archae - 204; Bacteria - 8491; Metazoa - 1613; Fungi - 754; Plants - 1355; Viruses - 0; Other Eukaryotes - 2647 (source: NCBI BLink).
Protein Annotations
BioGrid:5193EC:1.8.-.-eggNOG:COG0526eggNOG:KOG0907EMBL:AC023912EMBL:AF370315EMBL:AK318919
EMBL:AY063100EMBL:AY084959EMBL:CP002686EnsemblPlants:AT3G06730EnsemblPlants:AT3G06730.1entrez:819858Gene3D:3.40.30.10
GeneID:819858Genevisible:Q9M7X9GO:GO:0000103GO:GO:0006457GO:GO:0006662GO:GO:0006915GO:GO:0006952
GO:GO:0008219GO:GO:0009295GO:GO:0009507GO:GO:0009579GO:GO:0009657GO:GO:0015035GO:GO:0016671
GO:GO:0031347GO:GO:0034051GO:GO:0034599GO:GO:0045454GO:GO:0047134hmmpanther:PTHR10438hmmpanther:PTHR10438:SF276
HOGENOM:HOG000292977InParanoid:Q9M7X9IntAct:Q9M7X9InterPro:IPR005746InterPro:IPR012336InterPro:IPR013766KEGG:ath:AT3G06730
OMA:MMRDIINPANTHER:PTHR10438PaxDb:Q9M7X9Pfam:PF00085Pfam:Q9M7X9Pfscan:PS51352PhylomeDB:Q9M7X9
PRIDE:Q9M7X9PRO:PR:Q9M7X9PROSITE:PS51352ProteinModelPortal:Q9M7X9Proteomes:UP000006548RefSeq:NP_187329.1SMR:Q9M7X9
STRING:3702.AT3G06730.1SUPFAM:SSF52833TAIR:AT3G06730tair10-symbols:TRX Ptair10-symbols:TRX zUniGene:At.18842UniProt:Q9M7X9
Coordinates (TAIR10) chr3:+:2124276..2125845
Molecular Weight (calculated) 20671.30 Da
IEP (calculated) 5.73
GRAVY (calculated) -0.07
Length 183 amino acids
Sequence (TAIR10)
(BLAST)
001: MALVQSRTFP HLNTPLSPIL SSLHAPSSLF IRREIRPVAA PFSSSTAGNL PFSPLTRPRK LLCPPPRGKF VREDYLVKKL SAQELQELVK GDRKVPLIVD
101: FYATWCGPCI LMAQELEMLA VEYESNAIIV KVDTDDEYEF ARDMQVRGLP TLFFISPDPS KDAIRTEGLI PLQMMHDIID NEM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)