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AT3G05360.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.840
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor like protein 30
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor like protein 30 (RLP30); FUNCTIONS IN: kinase activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, signal transduction, response to cyclopentenone, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 11 (TAIR:AT1G71390.1); Has 101325 Blast hits to 29993 proteins in 1145 species: Archae - 37; Bacteria - 7130; Metazoa - 23873; Fungi - 1058; Plants - 61263; Viruses - 2; Other Eukaryotes - 7962 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG0619EMBL:AC009177EMBL:AY091056EMBL:AY117362EMBL:CP002686EnsemblPlants:AT3G05360
EnsemblPlants:AT3G05360.1entrez:819700Gene3D:3.80.10.10GeneID:819700GO:GO:0002237GO:GO:0002238GO:GO:0002240
GO:GO:0005886GO:GO:0009620GO:GO:0010204GO:GO:0016021GO:GO:0032491GO:GO:0050832Gramene:AT3G05360.1
hmmpanther:PTHR27004hmmpanther:PTHR27004:SF37HOGENOM:HOG000116562InterPro:IPR001611InterPro:IPR003591InterPro:IPR013210InterPro:IPR032675
KEGG:ath:AT3G05360OMA:ENGSNIGPfam:PF00560Pfam:PF08263Pfam:PF13516Pfam:PF13855Pfscan:PS51450
PhylomeDB:Q9MA83PROSITE:PS51450Proteomes:UP000006548RefSeq:NP_187187.1SMART:SM00369SMR:Q9MA83STRING:3702.AT3G05360.1
SUPFAM:SSF52058TAIR:AT3G05360tair10-symbols:AtRLP30tair10-symbols:RLP30TMHMM:TMhelixUniGene:At.40683UniProt:Q9MA83
Coordinates (TAIR10) chr3:-:1530900..1533260
Molecular Weight (calculated) 87532.10 Da
IEP (calculated) 6.18
GRAVY (calculated) -0.07
Length 786 amino acids
Sequence (TAIR10)
(BLAST)
001: MIPSQSNSFS GSVITLYFFL LGSLVLRTLA SSRLHYCRHD QRDALLEFKH EFPVSESKPS PSLSSWNKTS DCCFWEGVTC DDESGEVVSL DLSYVLLNNS
101: LKPTSGLFKL QQLQNLTLSD CHLYGEVTSS LGNLSRLTHL DLSSNQLTGE VLASVSKLNQ LRDLLLSENS FSGNIPTSFT NLTKLSSLDI SSNQFTLENF
201: SFILPNLTSL SSLNVASNHF KSTLPSDMSG LHNLKYFDVR ENSFVGTFPT SLFTIPSLQI VYLEGNQFMG PIKFGNISSS SRLWDLNLAD NKFDGPIPEY
301: ISEIHSLIVL DLSHNNLVGP IPTSISKLVN LQHLSLSNNT LEGEVPGCLW GLMTVTLSHN SFNSFGKSSS GALDGESMQE LDLGSNSLGG PFPHWICKQR
401: FLKYLDLSNN LFNGSIPPCL KNSTYWLKGL VLRNNSFSGF LPDVFVNASM LLSLDVSYNR LEGKLPKSLI NCTGMELLNV GSNIIKDTFP SWLVSLPSLR
501: VLILRSNAFY GSLYYDHISF GFQHLRLIDI SQNGFSGTLS PLYFSNWREM VTSVLEENGS NIGTEDWYMG EKGPEFSHSN SMTMIYKGVE TDFLRIPYFF
601: RAIDFSGNRF FGNIPESVGL LKELRLLNLS GNSFTSNIPQ SLANLTNLET LDLSRNQLSG HIPRDLGSLS FLSTMNFSHN LLEGPVPLGT QFQSQHCSTF
701: MDNLRLYGLE KICGKAHAPS STPLESEEFS EPEEQVINWI AAAIAYGPGV FCGLVIGHIF FTAHKHEWFM EKFHRNKRRV VTTSAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)