AT2G46250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin heavy chain-related | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
myosin heavy chain-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41620.1); Has 7147 Blast hits to 5689 proteins in 552 species: Archae - 71; Bacteria - 743; Metazoa - 3204; Fungi - 473; Plants - 374; Viruses - 9; Other Eukaryotes - 2273 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:18991386..18993201 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 54195.40 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.11 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.05 | ||||||||||||||||||||||||
| Length | 468 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MERECEEGEM EKKLRRSFMG YTRRAGPSTP PPTWRLEFSP PRVGATKEFL ANSEDSVRKL CADLWETEQF RQRIELRRCR RRDSDVESHS RSPLHDHPPS 101: RASLRRQIAA TDDYRNGDLL QPISPASCSS SSSSLQVVVR KPAFSQTGSS AVKSASYGLG SSTKLLKVLN RIWSLEEQNT ANMSLVRALK MELDECRAEI 201: KEVQQRKKLS DRPLRKKKEE EEVKDVFRSI KRELDDERKV RKESETLHRK LTRELCEAKH CLSKALKDLE KETQERVVVE NLCDEFAKAV KDYEDKVRRI 301: GKKSPVSDKV IVQIAEVWSD QRLQMKLEED DKTFLLRAKE KSRSQSSKGS GLRAKPDDSV SMHQRVCLKE LEEGLEKRTR RDNKLQLKKS SGQVLNLSMS 401: SEGDKIHPES SPRNVDDHES QEKSRTFSKN HPRNVNVMIR EDNHRTLKDK LMEARVESRR LRSSLKPE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)