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AT2G46090.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Diacylglycerol kinase family protein
Curator
Summary (TAIR10)
Encodes a putative sphingosine kinase (SphK) containing the five conserved domains (C1-C5) previously identified in SphKs.
Computational
Description (TAIR10)
Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Conserved hypothetical protein CHP00147 (InterPro:IPR005218); BEST Arabidopsis thaliana protein match is: long-chain base (LCB) kinase 1 (TAIR:AT5G23450.2); Has 6078 Blast hits to 6077 proteins in 1657 species: Archae - 15; Bacteria - 4829; Metazoa - 327; Fungi - 124; Plants - 145; Viruses - 0; Other Eukaryotes - 638 (source: NCBI BLink).
Protein Annotations
EC:2.7.-.-eggNOG:COG1597eggNOG:KOG1116EMBL:AC005397EMBL:AF387014EMBL:AY072531EMBL:CP002685
EnsemblPlants:AT2G46090EnsemblPlants:AT2G46090.1entrez:819217GeneID:819217Genevisible:O82359GO:GO:0005524GO:GO:0005739
GO:GO:0006671GO:GO:0009409GO:GO:0017050Gramene:AT2G46090.1hmmpanther:PTHR12358hmmpanther:PTHR12358:SF43HOGENOM:HOG000261394
InParanoid:O82359InterPro:IPR001206InterPro:IPR005218InterPro:IPR016064KEGG:ath:AT2G46090OMA:KGTHITHPaxDb:O82359
Pfam:O82359Pfam:PF00781Pfscan:PS50146PhylomeDB:O82359PIR:F84898PRIDE:O82359PRO:PR:O82359
PROSITE:PS50146ProteinModelPortal:O82359Proteomes:UP000006548RefSeq:NP_566064.1SMART:SM00046SMR:O82359STRING:3702.AT2G46090.1
SUPFAM:SSF111331TAIR:AT2G46090TIGRfam:TIGR00147TIGRFAMs:TIGR00147UniGene:At.13073UniProt:O82359
Coordinates (TAIR10) chr2:+:18950919..18953079
Molecular Weight (calculated) 39657.40 Da
IEP (calculated) 8.64
GRAVY (calculated) -0.15
Length 364 amino acids
Sequence (TAIR10)
(BLAST)
001: MLRSTCCTPL CPFTAKQPSF LRKQQRITSD RFTFRGGGGG DAAAVVSSSG LRDLVFVVNP QGANGRTAKE WKKLLPHLRS RLGKDCNVSE LLTSGPSHAI
101: DITREAIRDG ADAVIAVGGD GTLHEVVNGF FWEGKPVGYL SGEASRSTAL GLIPLGTGSD FARTFGWNND PCEAVERIAR GMRSRIDVGV IDKEGKDLHY
201: FINVADVHLS AKAGFYASKY KKFGNLCYVI GALQAFMGHH NQDMRIRVNG GEWEIYPQVT ALCVGNAKYF GGGMKITPNA IPGNGNLEVV VLQNFKWYDF
301: VLKLHKLYNG THLSVNNVTS RSVQSIEVEE ITDSGSIYVQ SDGEHLGFLP RKFQVLPGAI DIIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)