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AT2G45360.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.988
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1442)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT3G60780.1); Has 113 Blast hits to 112 proteins in 16 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJPGeggNOG:ENOG410YKDWEMBL:AC002387EMBL:AK118397EMBL:BT005233EMBL:CP002685EnsemblPlants:AT2G45360
EnsemblPlants:AT2G45360.1entrez:819144GeneID:819144Gramene:AT2G45360.1hmmpanther:PTHR33593hmmpanther:PTHR33593:SF2HOGENOM:HOG000239049
IntAct:O22136InterPro:IPR009902KEGG:ath:AT2G45360OMA:ISGFKWHPfam:PF07279PhylomeDB:O22136PIR:F84889
Proteomes:UP000006548RefSeq:NP_182061.1STRING:3702.AT2G45360.1TAIR:AT2G45360UniGene:At.28771UniGene:At.36643UniProt:O22136
Coordinates (TAIR10) chr2:+:18698619..18699360
Molecular Weight (calculated) 23792.60 Da
IEP (calculated) 9.65
GRAVY (calculated) -0.12
Length 215 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)