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AT2G36950.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.764
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Heavy metal transport/detoxification superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G03380.1); Has 2801 Blast hits to 1963 proteins in 260 species: Archae - 0; Bacteria - 269; Metazoa - 336; Fungi - 47; Plants - 1796; Viruses - 4; Other Eukaryotes - 349 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2608eggNOG:KOG1603EMBL:AC006922EMBL:CP002685EnsemblPlants:AT2G36950EnsemblPlants:AT2G36950.1entrez:818269
GeneID:818269GO:GO:0005507GO:GO:0030001Gramene:AT2G36950.1hmmpanther:PTHR22814hmmpanther:PTHR22814:SF100HOGENOM:HOG000239741
InterPro:IPR006121KEGG:ath:AT2G36950OMA:ASESYVPPfam:PF00403Pfscan:PS50846PhylomeDB:Q9SJL2PIR:F84786
PROSITE:PS50846Proteomes:UP000006548RefSeq:NP_565855.1SMR:Q9SJL2STRING:3702.AT2G36950.1SUPFAM:SSF55008TAIR:AT2G36950
UniGene:At.24096UniProt:Q9SJL2
Coordinates (TAIR10) chr2:+:15515216..15516754
Molecular Weight (calculated) 40359.20 Da
IEP (calculated) 8.95
GRAVY (calculated) -0.61
Length 386 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEVQEGPKV EQEKKPAATV VPVETTDGKP KSGGGDSAAA AAPPVAAVVS AFVYKVDMHC EGCAKKIKRM VKHFDGVKDV TADTGGNKLL VVGKIDPVKL
101: QEKLEEKTKR KVVLANPPPK VEGPVAAAVG EKKADGGDKE AAPPAPAPAA PKESVVPLKI RLHCEGCIQK IKKIILKIKG VETVAIDGAK DVVTVKGTID
201: VKELVPLLTK KLKRTVEPLV PAKKDDGAAE NKKTEAAAPD AKKEAPSAGV NEAKKEGSDG GEKKKEVGDG GEKKKEGGDG GEKKKEAGDG GEKKKDGGGV
301: PAPVAMVNKM DYYGYSAYPT APMHWQEGHV YGQSYSMTGQ NYPVGGQSYP GSGYNYASES YVPYAQPNVN APGMFSDENP NGCSVM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)