AT2G33630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 15942 Blast hits to 15941 proteins in 2471 species: Archae - 466; Bacteria - 10729; Metazoa - 579; Fungi - 380; Plants - 472; Viruses - 127; Other Eukaryotes - 3189 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:14236951..14238734 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53438.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.89 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.09 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 480 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHLSENEGVE GNTFVVTGGL GFVGAALCLE LVRRGARQVR SFDLRHSSPW SDDLKNSGVR CIQGDVTKKQ DVDNALDGAD CVLHLASYGM SGKEMLRFGR 101: CDEVNINGTC NVLEAAFKHE ITRIVYVSTY NVVFGGKEIL NGNEGLPYFP LDDHVDAYSR TKSIAEQLVL KSNGRPFKNG GKRMYTCAIR PAAIYGPGED 201: RHLPRIVTLT KLGLALFKIG EPSVKSDWIY VENLVLAIIL ASMGLLDDIP GREGQPVAAG QPYFVSDGYP VNTFEFLRPL LKSLDYDLPK CTISVPFALS 301: LGKIFQGFYT VLYPWLSKSW LPQPLVLPAE VYKVGVTHYF SYLKAKEELG YVPFKSSKEG MAATISYWQE RKRRSLDGPT MFTWIAVTIG MSALFAAGWL 401: PDIGPVPFLR AIHLFFFRTI TIVKAVFIVA VVLHVAEGIY AWFLAKRVDP GNAMGWFLQT SALGFFSMRF LLKRAKEHQI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)