AT2G24230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.958 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58150.1); Has 160590 Blast hits to 111718 proteins in 3143 species: Archae - 143; Bacteria - 16976; Metazoa - 54491; Fungi - 7303; Plants - 65091; Viruses - 227; Other Eukaryotes - 16359 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10301979..10304540 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 94122.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.93 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 853 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGLGLGFWGY ALFLSLFLKQ SHCQEPNTDG FFVSEFYKQM GLSSSQAYNF SAPFCSWQGL FCDSKNEHVI MLIASGMSLS GQIPDNTIGK LSKLQSLDLS 101: NNKISALPSD FWSLNTLKNL NLSFNKISGS FSSNVGNFGQ LELLDISYNN FSGAIPEAVD SLVSLRVLKL DHNGFQMSIP RGLLGCQSLV SIDLSSNQLE 201: GSLPDGFGSA FPKLETLSLA GNKIHGRDTD FADMKSISFL NISGNQFDGS VTGVFKETLE VADLSKNRFQ GHISSQVDSN WFSLVYLDLS ENELSGVIKN 301: LTLLKKLKHL NLAWNRFNRG MFPRIEMLSG LEYLNLSNTN LSGHIPREIS KLSDLSTLDV SGNHLAGHIP ILSIKNLVAI DVSRNNLTGE IPMSILEKLP 401: WMERFNFSFN NLTFCSGKFS AETLNRSFFG STNSCPIAAN PALFKRKRSV TGGLKLALAV TLSTMCLLIG ALIFVAFGCR RKTKSGEAKD LSVKEEQSIS 501: GPFSFQTDST TWVADVKQAN AVPVVIFEKP LLNITFSDLL SATSNFDRDT LLADGKFGPV YRGFLPGGIH VAVKVLVHGS TLSDQEAARE LEFLGRIKHP 601: NLVPLTGYCI AGDQRIAIYE YMENGNLQNL LHDLPFGVQT TDDWTTDTWE EETDNGTQNI GTEGPVATWR FRHKIALGTA RALAFLHHGC SPPIIHRDVK 701: ASSVYLDQNW EPRLSDFGLA KVFGNGLDDE IIHGSPGYLP PEFLQPEHEL PTPKSDVYCF GVVLFELMTG KKPIEDDYLD EKDTNLVSWV RSLVRKNQAS 801: KAIDPKIQET GSEEQMEEAL KIGYLCTADL PSKRPSMQQV VGLLKDIEPK SNQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)