AT2G03140.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: esterase/lipase/thioesterase family protein (TAIR:AT3G50790.1); Has 27771 Blast hits to 17358 proteins in 1793 species: Archae - 160; Bacteria - 9618; Metazoa - 7252; Fungi - 2757; Plants - 1033; Viruses - 122; Other Eukaryotes - 6829 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:942000..949337 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 196061.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.73 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||
| Length | 1797 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MYSSSSSSSI FLQFPPARIT TASPFILRRS RKRGARFKRQ SRNLVLVNSS IFPPPFDGSV PLDSSLAPSL AGIASGLAVY LSSRFFGKSL EKISDKIVDD 0101: VVVGEWILFT TPTPFNRFVL LRCSLLSFDD DSEKSLSDRL VTEERHFVTL DSGKIVRDGA VTDEKTPLEY QRVCITMEDG GVVSLDWPAN LDIREERGLD 0201: TTVVFIPGTP EGSMEEGVRS FVCEALRRGV FPVVMNPRGC AGSPLTTPRL FTAGDSDDIS TALRFLSKTR PWTTLTAVGR GYGANMLTKY LAEAGERTPL 0301: TAAVCIDNPF DLEEITRTSP YSTSLDQQLT RGLVEILLAN KELFQGRAKA FDVGKALCSK SVREFDKALS MVTYGCESIE DFYSSCATRE VIGEVKVPLL 0401: FIQNDDVVPP YTIPRSSIAE NPFTSLLLCS SSPNLIDGRT VAVSWCQDLA SEWLTAVELG LLKGRHPLLE DVDVTVNPSK GLVFSEARAP EKSIGAKKLV 0501: QAAHEKTVNG YHLDPFRETL EDSDMTPNSN LSPETDLEKN VKIDYGSDET ENNIVSTRVE SIEDNESNVE ESDRGQVLQT AEVVVSMLDV TMPGTLKAEE 0601: KKKVMDAVGR GETVLTALQD AVPEDVREKL TTAVTGILQS GGTKLNLENL KLPSIAPGLK KAEEEKKETS SAIGQSDSYS PDPKDKSDGL VSGSDETISG 0701: SDNSPGGVEL EHSPSKVSQR NSDSGKSQPV DNDQDDSPGN HESHTNEKTS AADDSEMASE AKSDSANQGP IGAEAVTNND DKVEQGSGVA THQGQVETSK 0801: NDEKGAPIAN EKSSVADGFE KASDAKNDST NPQPVGADDI TSDGDKVDQG VVLAQQQRKD ETSKSDENAK QSATDQNKVT STDNEGDAGK SSASQPVEKD 0901: ESNDQSKETK VMQPVSDQTK PAIQEPNQPN FNVSQAFEAL TGMDDSTQVA VNSVFGVLEN MISQLDEEKK EGNEVSDEKN LKDEKNLKDA KNVTNEVVSP 1001: SEEEIPYKRE TKSLMPSAKS RDPACSVSET EKCSDNDKVT GVVIEKQLGR DEFVIGKHSP KILPERKTDS IENSSHDGYL GEELSKEKIA KQLDLDTTTA 1101: LMLDYYPEEG KWKLLDQQPK RLDDDYYPEE GKWKLLDQQP EYLGNVADNA AASRNTHDNV QVHSLSVDNE ETIEPSYVIV DHEQELELSG MHDAADNQND 1201: GPHKLDEGCE ELEHLINVIV SDSLNVEIQR RMGSAGMRQI ESQLSRDIKK VAKTFSYAVV YSEPTWTFKR NSKTSNVPAG KVGKLRGDAI IRAIASAVQE 1301: AHFLRQVLPI GVVVGSVLAA LRKYFDVSTT TNNAKRDVVP GRRQKYENNG AMASVLPDKV SKETKQNNSS IGEMVESGLQ SINNKSAMVG AVTAALGASA 1401: MLVQHEDPQR GGIMSKSSDK DSQQKESGQL DQSSMVGSFA EKAMSIAGPA VPTKETGEVD QDRIVAMLAD LGQRGGILSL VGKLALLWGG LRGAMSLTDR 1501: LIQFLHMDEW PLLKRAVGFI GMVLVLWSPV VIPLLPTLLQ NWSTSNPSRV AELASVVGLY VAVFILVMLW GKRVRKYENP FKQYGLDLKA SNKEKIQEFL 1601: KAFAGGITVV LLIQFINAIS GAAFLSRPPY FPHSFDAMKW LKGCGQFLLL IIRGFTAATF VVLVEELLFR SWMPAEIAID LGYHQSIIIT GLIFALFQRS 1701: LRSIPGFWLL SLALTWARER SQGNLIVPIG LRAGIIASSF ILQSGGFLTY NPSSPVWIAG SRPSQPFSGV VGLMVSLALA LILYPKRSPE TKMQKYN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)