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AT1G75870.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 10 Blast hits to 10 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JW70eggNOG:ENOG411057JEMBL:AC007396EMBL:AY735568EMBL:CP002684EMBL:DQ459175EnsemblPlants:AT1G75870
EnsemblPlants:AT1G75870.1entrez:843920GeneID:843920Gramene:AT1G75870.1HOGENOM:HOG000153076KEGG:ath:AT1G75870OMA:ARTRLCK
PIR:H96787Proteomes:UP000006548RefSeq:NP_177715.1STRING:3702.AT1G75870.1TAIR:AT1G75870UniGene:At.50970UniProt:Q9LQS7
Coordinates (TAIR10) chr1:+:28486532..28487114
Molecular Weight (calculated) 19041.20 Da
IEP (calculated) 10.08
GRAVY (calculated) -0.78
Length 165 amino acids
Sequence (TAIR10)
(BLAST)
001: MQETQTKLSL SVTPVNANAP LPQNPAIPLG LIAPYHQQAK DINHMLQNQM TRELYGQLRS LEERAIFCVR VKDKVIEDMK KQCGEMEIRT RKALAEAEFW
101: RKMTNEKTDL CRDLAGRLIE MKKRERATRR LGVREMAEKA ESSTGDNGDD VVDTARTRLC KRRRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)