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AT1G75420.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 0.839
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G19710.1); Has 7008 Blast hits to 7002 proteins in 1487 species: Archae - 264; Bacteria - 4740; Metazoa - 98; Fungi - 57; Plants - 126; Viruses - 0; Other Eukaryotes - 1723 (source: NCBI BLink).
Protein Annotations
CAZy:GT4eggNOG:COG0438eggNOG:KOG0853EMBL:AK229704EMBL:BT008621EMBL:CP002684EMBL:KJ138930
EnsemblPlants:AT1G75420EnsemblPlants:AT1G75420.1entrez:843878GeneID:843878GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0016021GO:GO:0016740Gramene:AT1G75420.1hmmpanther:PTHR12526hmmpanther:PTHR12526:SF376HOGENOM:HOG000237742InterPro:IPR001296
KEGG:ath:AT1G75420ncoils:CoilOMA:LLFAMINPfam:PF00534Pfam:PF16994PhylomeDB:Q7Y217Proteomes:UP000006548
RefSeq:NP_177675.1SMR:Q7Y217STRING:3702.AT1G75420.1SUPFAM:SSF53756TAIR:AT1G75420TMHMM:TMhelixUniGene:At.34777
UniProt:Q7Y217
Coordinates (TAIR10) chr1:+:28305469..28307317
Molecular Weight (calculated) 51760.80 Da
IEP (calculated) 10.20
GRAVY (calculated) 0.02
Length 463 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKASTMQRK RWALMVLLFL SVSTVCMILV RSSFETCSIS SQFVEEKNGE SSAAKFQSNP LDFMKSKLVL LVSHELSLSG GPLLLMELAF LLRGVGADVV
101: WITNQKPLED DEVVYSLEHK MLDRGVQVIS AKGQKAVDTS LKADLIVLNT AVAGKWLDAV LKENVVKVLP KILWWIHEMR GHYFNADLVK HLPFVAGAMI
201: DSHATAGYWK NRTQARLGIK MPKTYVVHLG NSKELMEVAE DSVAKRVLRE HVRESLGVRN EDLLFGIINS VSRGKGQDLF LRAFHESLER IKEKKLQVPT
301: MHAVVVGSDM SKQTKFETEL RNFVREKKLE NFVHFVNKTL TVAPYIAAID VLVQNSQARG ECFGRITIEA MAFKLPVLGT AAGGTMEIVV NGTTGLLHSA
401: GKEGVIPLAK NIVKLATQVE LRLRMGKNGY ERVKEMFLEH HMSHRIASVL KEVLQHAKAR ALR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)