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AT1G67720.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G67720-MONOMERBioGrid:28318EC:2.7.11.1eggNOG:ENOG410IIJDeggNOG:ENOG410XT2CEMBL:AC008113EMBL:CP002684
EMBL:FJ708672EnsemblPlants:AT1G67720EnsemblPlants:AT1G67720.1entrez:843097Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:843097
Genevisible:C0LGI2GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT1G67720.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF82
HOGENOM:HOG000116550InParanoid:C0LGI2InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441InterPro:IPR024788InterPro:IPR032675KEGG:ath:AT1G67720OMA:VKIESIWPaxDb:C0LGI2Pfam:C0LGI2
Pfam:PF07714Pfam:PF12819Pfscan:PS50011PhylomeDB:C0LGI2PRIDE:C0LGI2PRO:PR:C0LGI2PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:C0LGI2Proteomes:UP000006548RefSeq:NP_564904.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:C0LGI2SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G67720TMHMM:TMhelixUniGene:At.26636
UniProt:C0LGI2
Coordinates (TAIR10) chr1:+:25386494..25390856
Molecular Weight (calculated) 103759.00 Da
IEP (calculated) 7.46
GRAVY (calculated) -0.24
Length 929 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLCLAQLAV TCLFLVPFVL SQVTEFVSID CGCSSNYTDP RTGLGWVSDS EIIKQGKPVT LANTNWNSMQ YRRRRDFPTD NKKYCYRLST KERRRYIVRT
101: TFLYGGLGSE EAYPKFQLYL DATKWATVTI QEVSRVYVEE LIVRATSSYV DVCVCCAITG SPFMSTLELR PLNLSMYATD YEDNFFLKVA ARVNFGAPNM
201: DALRYPDDPY DRIWESDINK RPNYLVGVAP GTTRINTSKT INTLTREYPP MKVMQTAVVG TQGLISYRLN LEDFPANARA YAYFAEIEEL GANETRKFKL
301: VQPYFPDYSN AVVNIAENAN GSYTLYEPSY MNVTLDFVLT FSFGKTKDST QGPLLNAIEI SKYLPISVKT DRSDVSVLDA IRSMSPDSDW ASEGGDPCIP
401: VLWSWVNCSS TSPPRVTKIA LSRKNLRGEI PPGINYMEAL TELWLDDNEL TGTLPDMSKL VNLKIMHLEN NQLSGSLPPY LAHLPNLQEL SIENNSFKGK
501: IPSALLKGKV LFKYNNNPEL QNEAQRKHFW QILGISIAAV AILLLLVGGS LVLLCALRKT KRADKGDSTE TKKKGLVAYS AVRGGHLLDE GVAYFISLPV
601: LEEATDNFSK KVGRGSFGSV YYGRMKDGKE VAVKITADPS SHLNRQFVTE VALLSRIHHR NLVPLIGYCE EADRRILVYE YMHNGSLGDH LHGSSDYKPL
701: DWLTRLQIAQ DAAKGLEYLH TGCNPSIIHR DVKSSNILLD INMRAKVSDF GLSRQTEEDL THVSSVAKGT VGYLDPEYYA SQQLTEKSDV YSFGVVLFEL
801: LSGKKPVSAE DFGPELNIVH WARSLIRKGD VCGIIDPCIA SNVKIESVWR VAEVANQCVE QRGHNRPRMQ EVIVAIQDAI RIERGNENGL KSSSSSSSKA
901: QSSRKTLLTS FLELESPDIS RNSLAPAAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)