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AT1G66150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : transmembrane kinase 1
Curator
Summary (TAIR10)
receptor-like transmembrane kinase I (TMK1)
Computational
Description (TAIR10)
transmembrane kinase 1 (TMK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity; INVOLVED IN: signal transduction; LOCATED IN: extracellular region, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01820.1); Has 173049 Blast hits to 137802 proteins in 4904 species: Archae - 168; Bacteria - 18898; Metazoa - 54853; Fungi - 11361; Plants - 66018; Viruses - 436; Other Eukaryotes - 21315 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G66150-MONOMERBioGrid:28151DIP:DIP-46512NEC:2.7.11.1eggNOG:ENOG410IIW7eggNOG:ENOG41102Z7EMBL:AC026480
EMBL:AK228659EMBL:BT006178EMBL:CP002684EMBL:FJ708669EMBL:L00670EnsemblPlants:AT1G66150EnsemblPlants:AT1G66150.1
entrez:842930Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:842930Genevisible:P43298GO:GO:0004675GO:GO:0005524
GO:GO:0005576GO:GO:0005886GO:GO:0007165GO:GO:0007178GO:GO:0016021Gramene:AT1G66150.1hmmpanther:PTHR27001
hmmpanther:PTHR27001:SF164HOGENOM:HOG000240631InParanoid:P43298IntAct:P43298InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441InterPro:IPR032675iPTMnet:P43298
KEGG:ath:AT1G66150KO:K00924MINT:MINT-8063714OMA:CKWTHIVPaxDb:P43298PDB:4HQ1PDBsum:4HQ1
Pfam:P43298Pfam:PF00069Pfam:PF08263Pfam:PF13855Pfscan:PS50011Pfscan:PS51450PhylomeDB:P43298
PIR:JQ1674PRIDE:P43298PRO:PR:P43298PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51450
ProteinModelPortal:P43298Proteomes:UP000006548RefSeq:NP_176789.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMART:SM00369
SMR:P43298STRING:3702.AT1G66150.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G66150tair10-symbols:TMK1TMHMM:TMhelix
UniGene:At.28076UniProt:P43298
Coordinates (TAIR10) chr1:+:24631503..24634415
Molecular Weight (calculated) 102393.00 Da
IEP (calculated) 6.34
GRAVY (calculated) -0.13
Length 942 amino acids
Sequence (TAIR10)
(BLAST)
001: MKKRRTFLLF SFTFLLLLSL SKADSDGDLS AMLSLKKSLN PPSSFGWSDP DPCKWTHIVC TGTKRVTRIQ IGHSGLQGTL SPDLRNLSEL ERLELQWNNI
101: SGPVPSLSGL ASLQVLMLSN NNFDSIPSDV FQGLTSLQSV EIDNNPFKSW EIPESLRNAS ALQNFSANSA NVSGSLPGFL GPDEFPGLSI LHLAFNNLEG
201: ELPMSLAGSQ VQSLWLNGQK LTGDITVLQN MTGLKEVWLH SNKFSGPLPD FSGLKELESL SLRDNSFTGP VPASLLSLES LKVVNLTNNH LQGPVPVFKS
301: SVSVDLDKDS NSFCLSSPGE CDPRVKSLLL IASSFDYPPR LAESWKGNDP CTNWIGIACS NGNITVISLE KMELTGTISP EFGAIKSLQR IILGINNLTG
401: MIPQELTTLP NLKTLDVSSN KLFGKVPGFR SNVVVNTNGN PDIGKDKSSL SSPGSSSPSG GSGSGINGDK DRRGMKSSTF IGIIVGSVLG GLLSIFLIGL
501: LVFCWYKKRQ KRFSGSESSN AVVVHPRHSG SDNESVKITV AGSSVSVGGI SDTYTLPGTS EVGDNIQMVE AGNMLISIQV LRSVTNNFSS DNILGSGGFG
601: VVYKGELHDG TKIAVKRMEN GVIAGKGFAE FKSEIAVLTK VRHRHLVTLL GYCLDGNEKL LVYEYMPQGT LSRHLFEWSE EGLKPLLWKQ RLTLALDVAR
701: GVEYLHGLAH QSFIHRDLKP SNILLGDDMR AKVADFGLVR LAPEGKGSIE TRIAGTFGYL APEYAVTGRV TTKVDVYSFG VILMELITGR KSLDESQPEE
801: SIHLVSWFKR MYINKEASFK KAIDTTIDLD EETLASVHTV AELAGHCCAR EPYQRPDMGH AVNILSSLVE LWKPSDQNPE DIYGIDLDMS LPQALKKWQA
901: YEGRSDLESS TSSLLPSLDN TQMSIPTRPY GFAESFTSVD GR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)