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AT1G60030.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nucleobase-ascorbate transporter 7
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nucleobase-ascorbate transporter 7 (NAT7); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: nucleobase-ascorbate transporter 8 (TAIR:AT1G10540.1); Has 9221 Blast hits to 9205 proteins in 1877 species: Archae - 67; Bacteria - 7547; Metazoa - 349; Fungi - 126; Plants - 456; Viruses - 1; Other Eukaryotes - 675 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2478-MONOMEReggNOG:COG2233eggNOG:KOG1292EMBL:AC005966EMBL:AK229125EMBL:CP002684EnsemblPlants:AT1G60030
EnsemblPlants:AT1G60030.1entrez:842297GeneID:842297Genevisible:Q0WPE9GO:GO:0005215GO:GO:0005886GO:GO:0009506
GO:GO:0016021GO:GO:0055085Gramene:AT1G60030.1hmmpanther:PTHR11119hmmpanther:PTHR11119:SF50HOGENOM:HOG000038202InParanoid:Q0WPE9
InterPro:IPR006043iPTMnet:Q0WPE9KEGG:ath:AT1G60030OMA:CCAPWISPANTHER:PTHR11119PaxDb:Q0WPE9Pfam:PF00860
Pfam:Q0WPE9PhylomeDB:Q0WPE9PIR:F96624PRIDE:Q0WPE9PRO:PR:Q0WPE9ProteinModelPortal:Q0WPE9Proteomes:UP000006548
Reactome:R-ATH-196836RefSeq:NP_176211.2STRING:3702.AT1G60030.1TAIR:AT1G60030tair10-symbols:ATNAT7tair10-symbols:NAT7TMHMM:TMhelix
UniGene:At.36734UniProt:Q0WPE9
Coordinates (TAIR10) chr1:-:22113993..22116648
Molecular Weight (calculated) 58511.80 Da
IEP (calculated) 9.79
GRAVY (calculated) 0.45
Length 538 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGGGGGGGG VAPPLKHDGL EPHPVKDQLS SISYCITSPP PWPEAILLGF QHYLVMLGTT VLIPTYLVPQ MGGGNEEKAK MVQTLLFVSG LNTLLQSFFG
101: TRLPAVIGGS YTYVPTTLSI ILAGRYSDIL DPQEKFKRIM RGIQGALIVA SILQIVVGFS GLWRNVVRLL SPLSAVPLVA LAGFGLYEHG FPLLAKCIEI
201: GLPEIILLLL FSQYIPHLIR GERQVFHRFA VIFSVVIVWI YAHLLTVGGA YKNTGVNTQT SCRTDRSGLI SGSPWIRVPY PFQWGPPTFH AGEAFAMMAV
301: SFVSLIESTG TYIVVSRFAS ATPPPPSVLS RGVGWQGVGV LLCGLFGAGN GASVSVENAG LLALTRVGSR RVVQISAGFM IFFSILGKFG AIFASIPAPV
401: VAALHCLFFA YVGAGGLSLL QFCNLNSFRT KFILGFSVFM GLSIPQYFNQ YTAVNKYGPV HTHARWFNDM INVPFSSKAF VAGILAFFLD VTMSSKDSAT
501: RKDRGMFWWD RFMSFKSDTR SEEFYSLPFN LNKYFPSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)