AT1G54390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : PHD finger protein-related | ||||||||
| Curator Summary (TAIR10) |
ING2 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. | ||||||||
| Computational Description (TAIR10) |
INHIBITOR OF GROWTH 2 (ING2); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G24010.1); Has 1029 Blast hits to 893 proteins in 166 species: Archae - 2; Bacteria - 0; Metazoa - 705; Fungi - 173; Plants - 97; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:20305012..20306943 | ||||||||
| Molecular Weight (calculated) | 34849.90 Da | ||||||||
| IEP (calculated) | 4.78 | ||||||||
| GRAVY (calculated) | -0.68 | ||||||||
| Length | 306 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MAIARTGVYV DDYLEYASTF PAELQRLLNT VRELDERSQS LINQTRQQTK YCLGLASQSS KKGNGNHYNN GGLDEEETIE KMRKEIESSQ ENALSLCTEK 101: VLLARQAYDL IDSHVKRLDE DLNNFAEDLK QEGKIPPDEP SVLPPLPIVP KAEKRKSFYG TPQPKKIDYR DRDWDRDRDF ELMPPPGSNR KDLMPIEEQP 201: IDPNEPTYCV CHQVSFGDMI ACDNENVSLL SQHLIIYFLM YSCYDETFCS CFDSAKEVNG FTIHALASHL RPDSKGNGTA PPADSSHSHT NIICTCEKVL 301: LYYHQN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)