AT1G79020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Enhancer of polycomb-like transcription factor protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT1G16690.1); Has 409 Blast hits to 407 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 106; Plants - 67; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29727282..29730059 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52401.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.68 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.78 | ||||||||||||||||||||||||||||||||||||
| Length | 453 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSRLSFRPRP LDIHKKLPIL KSFKDFEDDE TPTSTTRNSQ LLRIASVEVD NEVAPVPSKK PASEIPTPQF VIVDTYERDY SPTFGQPASY LRARGARSEL 101: GEFVEYDLDN EDEDWLYEFD KDKKELPPEK LEIIIFKLEV LDHKTRERAG VITPTLGSPV PVLLQFDAAS DVLQVLSINY GTFQAIFNYW KEKRKRWQKP 201: ILRRLQPPPP VNDTNPYNVF RPREKVHRLH TRRMQRRENN VQSFEKLRQV RRNLGQAQSI LEALIKREEK KRDVMDSEVS LQRIQLQYRH ETELLEDSLA 301: MPGFQPTTTS YKFGSSDDEL MDSDDHTSTR VRTRPAVIPS SRFTNLNLNA SHPGGIKQEV RRRQSQHGWL HRLDPNEPVM LFTKPLVPDK LAAAGIVPPT 401: PDSSPGQPPS RFQGRIGRGG RIIFDRWNPL MQSHINCGNS YYIAPNHRST NFD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)