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AT1G49650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 5 (TAIR:AT1G49660.1); Has 9107 Blast hits to 9083 proteins in 1488 species: Archae - 111; Bacteria - 5471; Metazoa - 421; Fungi - 765; Plants - 1374; Viruses - 3; Other Eukaryotes - 962 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G49650-MONOMEREC:3.1.1.1eggNOG:COG0657eggNOG:KOG1515EMBL:AC011807EMBL:AY085072EMBL:BT029001
EMBL:CP002684EnsemblPlants:AT1G49650EnsemblPlants:AT1G49650.1entrez:841389ESTHER:arath-Q8LF34Gene3D:3.40.50.1820GeneID:841389
Genevisible:Q9FX93GO:GO:0052689Gramene:AT1G49650.1hmmpanther:PTHR23024hmmpanther:PTHR23024:SF131HOGENOM:HOG000152317InParanoid:Q9FX93
InterPro:IPR013094InterPro:IPR029058KEGG:ath:AT1G49650OMA:WINKYADPaxDb:Q9FX93Pfam:PF07859Pfam:Q9FX93
PhylomeDB:Q9FX93PRIDE:Q9FX93PRO:PR:Q9FX93ProteinModelPortal:Q9FX93Proteomes:UP000006548RefSeq:NP_564550.1SMR:Q9FX93
STRING:3702.AT1G49650.1SUPFAM:SSF53474TAIR:AT1G49650UniGene:At.38186UniGene:At.38188UniProt:Q9FX93
Coordinates (TAIR10) chr1:-:18377363..18378487
Molecular Weight (calculated) 41695.30 Da
IEP (calculated) 6.99
GRAVY (calculated) -0.30
Length 374 amino acids
Sequence (TAIR10)
(BLAST)
001: MLRRITCSSS LASPSLFLRF FRQLPRSYSS PTTIAVSGRN IRRLSTPTTL RCICSHSSSE IISEHPPFVR VYKDGRIERL SGTETVPASL NPRNDVVSKD
101: VVYSPGHNLS VRLFLPHKST QLAAGNKLPL LIYFHGGAWI NESPFSPIYH NFLTEVVKSA NCLAVSVQYR RAPEDPVPAA YEDTWSAIQW IFSHSCGSGE
201: EDWINKYADF ERVFLAGDSA GGNISHHMAM RAGKEKLKPR IKGTVIVHPA IWGKDPVDEH DVQDREIRDG VAEVWEKIVS PNSVDGADDP WFNVVGSGSN
301: FSGMGCDKVL VEVAGKDVFW RQGLAYAAKL KKSGWKGEVE VIEEEDEEHC FHLLNPSSEN APSFMKRFVE FITG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)