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AT1G33811.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G45670.1); Has 3440 Blast hits to 3395 proteins in 215 species: Archae - 0; Bacteria - 336; Metazoa - 0; Fungi - 3; Plants - 3084; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G33811-MONOMEREC:3.1.1.-eggNOG:ENOG410IJZMeggNOG:ENOG410Y9W7EMBL:AC010164EMBL:AY099832EMBL:BT000322
EMBL:CP002684EnsemblPlants:AT1G33811EnsemblPlants:AT1G33811.1entrez:840274Gene3D:3.40.50.1110GeneID:840274Genevisible:Q8L5Z1
GO:GO:0005576GO:GO:0016042GO:GO:0016788Gramene:AT1G33811.1hmmpanther:PTHR22835hmmpanther:PTHR22835:SF207HOGENOM:HOG000237649
InParanoid:Q8L5Z1InterPro:IPR001087InterPro:IPR013830KEGG:ath:AT1G33811OMA:PCDDRSKPaxDb:Q8L5Z1Pfam:PF00657
Pfam:Q8L5Z1PhylomeDB:Q8L5Z1PIR:F86461PRIDE:Q8L5Z1PRO:PR:Q8L5Z1ProteinModelPortal:Q8L5Z1Proteomes:UP000006548
RefSeq:NP_564430.1STRING:3702.AT1G33811.1SUPFAM:SSF52266TAIR:AT1G33811UniGene:At.15845UniProt:Q8L5Z1
Coordinates (TAIR10) chr1:+:12267918..12269690
Molecular Weight (calculated) 41699.70 Da
IEP (calculated) 9.51
GRAVY (calculated) -0.29
Length 370 amino acids
Sequence (TAIR10)
(BLAST)
001: MGILRFVLLI SLNLVLFGFK TTVSQPQQQA QVPCLFIFGD SLVDNGNNNR LLSLARANYR PYGIDFPQGT TGRFTNGRTY VDALAQILGF RNYIPPYSRI
101: RGQAILRGAN FASGAAGIRD ETGDNLGAHT SMNQQVELYT TAVQQMLRYF RGDTNELQRY LSRCIFYSGM GSNDYLNNYF MPDFYSTSTN YNDKTFAESL
201: IKNYTQQLTR LYQFGARKVI VTGVGQIGCI PYQLARYNNR NNSTGRCNEK INNAIVVFNT QVKKLVDRLN KGQLKGAKFV YLDSYKSTYD LAVNGAAYGF
301: EVVDKGCCGV GRNNGQITCL PLQTPCPDRT KYLFWDAFHP TETANILLAK SNFYSRAYTY PINIQELANL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)