AT1G04800.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glycine-rich protein | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; Has 109132 Blast hits to 26905 proteins in 1855 species: Archae - 173; Bacteria - 37969; Metazoa - 32319; Fungi - 6881; Plants - 10265; Viruses - 1569; Other Eukaryotes - 19956 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:1348635..1349237 | ||||||||||||||||||||
| Molecular Weight (calculated) | 18046.40 Da | ||||||||||||||||||||
| IEP (calculated) | 7.91 | ||||||||||||||||||||
| GRAVY (calculated) | 0.01 | ||||||||||||||||||||
| Length | 200 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGLIAGKVRV FVLVFALVTD FTMGEAEFGD EKPLFPHPHP HPLLHKKGFK KEFGDLGGGG GISGGGGFGA GGGWIGGSVG GFGGGIGGGF GGGGFGGGAG 101: KGVDGGFGKG VDGGAGKGVD GGAGKGFDGG VGKGVDGGAG KGFDGGVGKG FEGGIGKGIE GGVGKGFDGG AGKGVDGGAI GGIGGGAGKE IGGGIGGGGH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)