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AT1G20620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25641898 (2015): plasma membrane
  • PMID:24727099 (2014): mitochondrion
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24130194 (2013): peroxisome
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23444301 (2013): mitochondrion
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21531424 (2011): plastid
  • PMID:21472856 (2011): mitochondrion
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:17951448 (2007): peroxisome
  • PMID:17317660 (2007): plasma membrane
  • PMID:15574830 (2004): plasma membrane
  • PMID:15028209 (2004): plastid
  • PMID:14671022 (2004): mitochondrion
  • PMID:14581625 (2003): peroxisome
  • PMID:12938931 (2003): plastid
  • PMID:12154131 (2002): peroxisome
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : catalase 3
Curator
Summary (TAIR10)
Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.
Computational
Description (TAIR10)
catalase 3 (CAT3); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 11 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 6176 Blast hits to 6156 proteins in 1860 species: Archae - 22; Bacteria - 4351; Metazoa - 678; Fungi - 546; Plants - 456; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1471-MONOMERBioCyc:ARA:GQT-1472-MONOMERBioCyc:ARA:GQT-1473-MONOMERBioGrid:23890EC:1.11.1.6eggNOG:COG0753eggNOG:KOG0047
EMBL:AC027665EMBL:AC069251EMBL:AF021937EMBL:AY056447EMBL:AY058104EMBL:AY087477EMBL:CP002684
EMBL:U43147EnsemblPlants:AT1G20620EnsemblPlants:AT1G20620.1entrez:838651ExpressionAtlas:Q42547Gene3D:2.40.180.10GeneID:838651
Genevisible:Q42547GO:GO:0004096GO:GO:0005618GO:GO:0005739GO:GO:0005773GO:GO:0005777GO:GO:0005886
GO:GO:0006979GO:GO:0006995GO:GO:0009409GO:GO:0009416GO:GO:0009506GO:GO:0009507GO:GO:0009570
GO:GO:0009941GO:GO:0009970GO:GO:0016020GO:GO:0016036GO:GO:0020037GO:GO:0022626GO:GO:0042744
GO:GO:0046686GO:GO:0048046GO:GO:0050897GO:GO:0098869gramene_pathway:1.11.1.6gramene_pathway:DETOX1-PWYgramene_pathway:PWY66-162
hmmpanther:PTHR11465hmmpanther:PTHR11465:SF19HOGENOM:HOG000087852IntAct:Q42547InterPro:IPR002226InterPro:IPR010582InterPro:IPR011614
InterPro:IPR018028InterPro:IPR020835InterPro:IPR024711iPTMnet:Q42547KEGG:00380+1.11.1.6KEGG:00630+1.11.1.6MINT:MINT-8067634
OMA:KFTKEDGPANTHER:PTHR11465PaxDb:Q42547PeroxiBase:5143Pfam:PF00199Pfam:PF06628Pfam:Q42547
Pfscan:PS51402PhylomeDB:Q42547PIR:S71112PIRSF:PIRSF038928PRIDE:Q42547PRINTS:PR00067PRO:PR:Q42547
PROSITE:PS00437PROSITE:PS51402ProteinModelPortal:Q42547Proteomes:UP000006548Reactome:R-ATH-3299685Reactome:R-ATH-74259RefSeq:NP_564120.1
scanprosite:PS00437SMART:SM01060SMR:Q42547STRING:3702.AT1G20620.1SUPFAM:SSF56634TAIR:AT1G20620tair10-symbols:ATCAT3
tair10-symbols:CAT3tair10-symbols:SEN2UniGene:At.24821UniProt:Q42547
Coordinates (TAIR10) chr1:+:7143142..7146193
Molecular Weight (calculated) 56698.30 Da
IEP (calculated) 7.69
GRAVY (calculated) -0.48
Length 492 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPYKYRPSS AYNAPFYTTN GGAPVSNNIS SLTIGERGPV LLEDYHLIEK VANFTRERIP ERVVHARGIS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVVHER ASPETMRDIR GFAVKFYTRE GNFDLVGNNT PVFFIRDGIQ FPDVVHALKP NPKTNIQEYW RILDYMSHLP ESLLTWCWMF DDVGIPQDYR
201: HMEGFGVHTY TLIAKSGKVL FVKFHWKPTC GIKNLTDEEA KVVGGANHSH ATKDLHDAIA SGNYPEWKLF IQTMDPADED KFDFDPLDVT KIWPEDILPL
301: QPVGRLVLNR TIDNFFNETE QLAFNPGLVV PGIYYSDDKL LQCRIFAYGD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEI NYYPSKFDPV
401: RCAEKVPTPT NSYTGIRTKC VIKKENNFKQ AGDRYRSWAP DRQDRFVKRW VEILSEPRLT HEIRGIWISY WSQADRSLGQ KLASRLNVRP SI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)