AT5G62760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 7376 Blast hits to 5164 proteins in 470 species: Archae - 2; Bacteria - 500; Metazoa - 3049; Fungi - 1087; Plants - 1477; Viruses - 399; Other Eukaryotes - 862 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:25204730..25209393 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74211.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.91 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.82 | ||||||||||||||||||||||||||||||||
| Length | 661 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDNNYQNYHH HHNHNHQQQW RPAPTQPNIC PICTVPHFPF CPPYPPPSSF AYNPNFPPPP HLNSPRPGFD SFTGPPVRPP QNHYPPWQPH HGNQWRPVAV 101: DVDREADRSY KRARIDTIAG GSPGYGVSES PSPRISWENE RRLKMVRDHG YGLAAPSNIE MNHQYGSEFR NGGQFNGVAP LPPPPPHHPP PYGGYFSGSN 201: GQPPLPVSPP PPLPSSHPSS LFPVTTNSSP TIPPSSSYPQ MPNASPSSAQ LAPTRSKVID VSHLLKPPHR STRPDHFVII LRGLPGSGKS YLAKLLRDVE 301: VENGGSAPRI HSMDDYFMTE VEKVEESDST SLSSGRSKRP IVKTVMEYCY EPEMEEAYRS SMLKAFKRTL EDGAFSFVIV CFLELTVSCW YMSLILVDDR 401: NLRVADFTQF WATAKRSGYE AYILEATYKD PTGCAARNVH GITVDQVQQM AEQWEEAPSL YMQLDIKSFT RWDDLKENEI QEVDMDMEDD FGLPERKSDN 501: STQSEEKGAT EGSYKSESKW DAESGSRTEE VKELSRSKWS NVEEDETENS QSMRRNSKSL PKSSQERQRK GKSVWWGDKG GDAGFSIGAA RNMNMPSLII 601: GPGSGYNVKS NPLSAEESRA LADAIGKAKV RGIFQDQLRA ERESFKAVFD KRHVRIVTKD K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)