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AT5G51795.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNA/RNA-binding protein Kin17, conserved region
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNA/RNA-binding protein Kin17, conserved region; CONTAINS InterPro DOMAIN/s: DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT1G55460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XRJ7eggNOG:KOG2837EMBL:CP002688EnsemblPlants:AT5G51795
EnsemblPlants:AT5G51795.1entrez:835254GeneID:835254Gramene:AT5G51795.1
hmmpanther:PTHR12805InParanoid:F4KDD7InterPro:IPR019447KEGG:ath:AT5G51795
ncoils:CoilOMA:ERASAGCPaxDb:F4KDD7Pfam:PF10357
PhylomeDB:F4KDD7PRIDE:F4KDD7ProteinModelPortal:F4KDD7Proteomes:UP000006548
RefSeq:NP_680423.1SMART:SM01253SMR:F4KDD7STRING:3702.AT5G51795.1
TAIR:AT5G51795UniGene:At.19003UniProt:F4KDD7
Coordinates (TAIR10) chr5:-:21043083..21044194
Molecular Weight (calculated) 40103.80 Da
IEP (calculated) 6.05
GRAVY (calculated) -0.74
Length 347 amino acids
Sequence (TAIR10)
(BLAST)
001: MFVMSSSSIP NGIFIIDGQE RYVNPEGDVE SNKSERTSKA SMVFQMCEKQ CRDENGFKCH CMSESHQRQM QVLGQNPTRV VNGYSQEFEQ TFLDLMRRSH
101: RFSRVAATVV YNEYINDRLH VHMNSTKWAT LTEFIKYLGK TAEEEKQERE IQKQIERASA GCEGKDVVVD DDDNDDDEKK KDEDFRLKKV GFALGLGVKE
201: RGESSKLVFG DEENDKVERG DKRKRSALDE LMKEEEKKKE RMNRKDYWLF EGIIVKGVVK RVIDKYVGEI EMLESKHVLR VDQVELKTVL PQIGGMVKIV
301: NGAYRGSNTR LLDLDTEKFC AKVQIEKGVY DGRVIKSIEY EDICKLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)