AT5G24260.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : prolyl oligopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9B, dipeptidylpeptidase IV N-terminal (InterPro:IPR002469); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:8234865..8237810 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 83856.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.70 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||||||||||
| Length | 746 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADKDVPFGV EDIVQTPLPG YVAPTAVSFS PDDSLITYLF SPEKNLKRRV YAFDVNKGES NLVFSPPDGG VDESNISPEE KLRRERLRER GLGVTRYEWV 101: KTNSKMRFIV VPLPAGVYMK DLSSSPNPEL IVPSSPTSPI IDPRLSPNGL FLAYVRESEL HVLNLLKNQT QQLTSGANGS TLSHGLAEYI AQEEMDRRNG 201: YWWSLDSKFI AYTEVDSSQI PLFRIMHQGK RSVGSEAQED HAYPFAGALN STLRLGVVSS AGGGKTTWMN LVCGGRGNTE DEYLGRVNWL PGNVLIVQVL 301: NRSQSKLKII SFDINTGQGN VLLTEESDTW VTLHDCFTPL EKVPSSRGSG GFIWASERTG FRHLYLYESD GTCLGAITSG EWMVEQIAGV NEPMSLVYFT 401: GTLDGPLETN LYCAKLEAGN TSRCQPMRLT HGKGKHIVVL DHQMKNFVDI HDSVDSPPRV SLCSLSDGTV LKILYEQTSP IQILKSLKLE PPEFVQIQAN 501: DGKTTLYGAV YKPDSSKFGP PPYKTMINVY GGPSVQLVYD SWINTVDMRT QYLRSRGILV WKLDNRGTAR RGLKFESWMK HNCGYVDAED QVTGAKWLIE 601: QGLAKPDHIG VYGWSYGGYL SATLLTRYPE IFNCAVSGAP VTSWDGYDSF YTEKYMGLPT EEERYLKSSV MHHVGNLTDK QKLMLVHGMI DENVHFRHTA 701: RLVNALVEAG KRYELLIFPD ERHMPRKKKD RIYMEQRIWE FIEKNL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)